Protein–RNA interactions for Protein: P0CW02

Ly6c1, Lymphocyte antigen 6C1, mousemouse

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ly6c1P0CW02 Gm9726-201ENSMUST00000180321 678 ntBASIC12.27□□□□□ -0.45
Ly6c1P0CW02 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ly6c1P0CW02 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
Ly6c1P0CW02 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ly6c1P0CW02 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ly6c1P0CW02 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ly6c1P0CW02 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ly6c1P0CW02 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ly6c1P0CW02 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ly6c1P0CW02 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ly6c1P0CW02 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ly6c1P0CW02 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ly6c1P0CW02 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ly6c1P0CW02 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ly6c1P0CW02 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ly6c1P0CW02 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Ly6c1P0CW02 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Ly6c1P0CW02 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Ly6c1P0CW02 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC12.27□□□□□ -0.45
Ly6c1P0CW02 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ly6c1P0CW02 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ly6c1P0CW02 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ly6c1P0CW02 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ly6c1P0CW02 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ly6c1P0CW02 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Ly6c1P0CW02 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ly6c1P0CW02 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC12.26□□□□□ -0.45
Ly6c1P0CW02 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
Ly6c1P0CW02 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC12.26□□□□□ -0.45
Ly6c1P0CW02 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
Ly6c1P0CW02 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ly6c1P0CW02 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ly6c1P0CW02 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
Ly6c1P0CW02 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ly6c1P0CW02 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC12.26□□□□□ -0.45
Ly6c1P0CW02 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC12.26□□□□□ -0.45
Ly6c1P0CW02 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC12.26□□□□□ -0.45
Ly6c1P0CW02 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ly6c1P0CW02 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
Ly6c1P0CW02 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ly6c1P0CW02 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ly6c1P0CW02 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ly6c1P0CW02 AC107452.3-201ENSMUST00000228807 1308 ntBASIC12.26□□□□□ -0.45
Ly6c1P0CW02 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ly6c1P0CW02 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ly6c1P0CW02 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ly6c1P0CW02 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ly6c1P0CW02 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ly6c1P0CW02 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ly6c1P0CW02 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ly6c1P0CW02 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ly6c1P0CW02 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ly6c1P0CW02 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ly6c1P0CW02 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ly6c1P0CW02 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ly6c1P0CW02 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC12.26□□□□□ -0.45
Ly6c1P0CW02 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ly6c1P0CW02 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ly6c1P0CW02 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ly6c1P0CW02 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ly6c1P0CW02 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
Ly6c1P0CW02 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ly6c1P0CW02 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ly6c1P0CW02 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ly6c1P0CW02 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Ly6c1P0CW02 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ly6c1P0CW02 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ly6c1P0CW02 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Ly6c1P0CW02 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ly6c1P0CW02 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Ly6c1P0CW02 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC12.25□□□□□ -0.45
Ly6c1P0CW02 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
Ly6c1P0CW02 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ly6c1P0CW02 Gm38225-201ENSMUST00000194001 393 ntBASIC12.25□□□□□ -0.45
Ly6c1P0CW02 Ighv8-7-201ENSMUST00000194349 297 ntBASIC12.25□□□□□ -0.45
Ly6c1P0CW02 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ly6c1P0CW02 2210412B16Rik-201ENSMUST00000201281 498 ntBASIC12.25□□□□□ -0.45
Ly6c1P0CW02 Gm5312-201ENSMUST00000203728 547 ntBASIC12.25□□□□□ -0.45
Ly6c1P0CW02 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ly6c1P0CW02 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC12.25□□□□□ -0.45
Ly6c1P0CW02 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ly6c1P0CW02 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ly6c1P0CW02 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Ly6c1P0CW02 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ly6c1P0CW02 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Ly6c1P0CW02 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Ly6c1P0CW02 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ly6c1P0CW02 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ly6c1P0CW02 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ly6c1P0CW02 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC12.25□□□□□ -0.45
Ly6c1P0CW02 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Ly6c1P0CW02 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ly6c1P0CW02 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ly6c1P0CW02 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Ly6c1P0CW02 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ly6c1P0CW02 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Ly6c1P0CW02 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ly6c1P0CW02 Gm37728-201ENSMUST00000195025 2292 ntBASIC12.25□□□□□ -0.45
Ly6c1P0CW02 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ly6c1P0CW02 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms