Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC12.31□□□□□ -0.44
Hoxa3P02831 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxa3P02831 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxa3P02831 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxa3P02831 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hoxa3P02831 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hoxa3P02831 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hoxa3P02831 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hoxa3P02831 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC12.3□□□□□ -0.44
Hoxa3P02831 BC037039-201ENSMUST00000192003 2205 ntBASIC12.3□□□□□ -0.44
Hoxa3P02831 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hoxa3P02831 Tfap2a-203ENSMUST00000223869 2037 ntBASIC12.3□□□□□ -0.44
Hoxa3P02831 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC12.3□□□□□ -0.44
Hoxa3P02831 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hoxa3P02831 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hoxa3P02831 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Hoxa3P02831 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hoxa3P02831 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hoxa3P02831 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Hoxa3P02831 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hoxa3P02831 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Hoxa3P02831 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hoxa3P02831 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hoxa3P02831 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hoxa3P02831 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hoxa3P02831 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Hoxa3P02831 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC12.3□□□□□ -0.44
Hoxa3P02831 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC12.3□□□□□ -0.44
Hoxa3P02831 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC12.3□□□□□ -0.44
Hoxa3P02831 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Hoxa3P02831 Gm6973-201ENSMUST00000117080 721 ntBASIC12.3□□□□□ -0.44
Hoxa3P02831 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Hoxa3P02831 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Hoxa3P02831 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC12.3□□□□□ -0.44
Hoxa3P02831 Mir6956-201ENSMUST00000183598 62 ntBASIC12.3□□□□□ -0.44
Hoxa3P02831 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Hoxa3P02831 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC12.3□□□□□ -0.44
Hoxa3P02831 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hoxa3P02831 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Hoxa3P02831 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Hoxa3P02831 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Hoxa3P02831 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hoxa3P02831 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Hoxa3P02831 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hoxa3P02831 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Hoxa3P02831 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hoxa3P02831 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hoxa3P02831 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC12.3□□□□□ -0.44
Hoxa3P02831 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hoxa3P02831 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hoxa3P02831 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hoxa3P02831 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hoxa3P02831 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Hoxa3P02831 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hoxa3P02831 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Hoxa3P02831 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Hoxa3P02831 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Hoxa3P02831 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Hoxa3P02831 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hoxa3P02831 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hoxa3P02831 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hoxa3P02831 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Hoxa3P02831 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hoxa3P02831 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hoxa3P02831 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hoxa3P02831 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Hoxa3P02831 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC12.29□□□□□ -0.44
Hoxa3P02831 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hoxa3P02831 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hoxa3P02831 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC12.29□□□□□ -0.44
Hoxa3P02831 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hoxa3P02831 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hoxa3P02831 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hoxa3P02831 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC12.29□□□□□ -0.44
Hoxa3P02831 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Hoxa3P02831 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Hoxa3P02831 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC12.29□□□□□ -0.44
Hoxa3P02831 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Hoxa3P02831 Gm25948-201ENSMUST00000175334 112 ntBASIC12.29□□□□□ -0.44
Hoxa3P02831 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC12.29□□□□□ -0.44
Hoxa3P02831 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Hoxa3P02831 AC166341.4-201ENSMUST00000220625 123 ntBASIC12.29□□□□□ -0.44
Hoxa3P02831 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Hoxa3P02831 CT010506.4-201ENSMUST00000225457 351 ntBASIC12.29□□□□□ -0.44
Hoxa3P02831 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hoxa3P02831 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hoxa3P02831 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC12.29□□□□□ -0.44
Hoxa3P02831 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hoxa3P02831 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Hoxa3P02831 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hoxa3P02831 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hoxa3P02831 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hoxa3P02831 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hoxa3P02831 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Hoxa3P02831 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC12.29□□□□□ -0.44
Hoxa3P02831 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Hoxa3P02831 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hoxa3P02831 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hoxa3P02831 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hoxa3P02831 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms