Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Gm37748-201ENSMUST00000194379 1140 ntBASIC17.76■□□□□ 0.43
Col4a1P02463 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Col4a1P02463 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC17.76■□□□□ 0.43
Col4a1P02463 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col4a1P02463 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col4a1P02463 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col4a1P02463 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Col4a1P02463 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col4a1P02463 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col4a1P02463 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col4a1P02463 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Col4a1P02463 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col4a1P02463 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Col4a1P02463 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col4a1P02463 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col4a1P02463 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col4a1P02463 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col4a1P02463 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col4a1P02463 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Col4a1P02463 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col4a1P02463 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC17.75■□□□□ 0.43
Col4a1P02463 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Col4a1P02463 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC17.75■□□□□ 0.43
Col4a1P02463 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col4a1P02463 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Col4a1P02463 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col4a1P02463 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.75■□□□□ 0.43
Col4a1P02463 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col4a1P02463 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col4a1P02463 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Col4a1P02463 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC17.75■□□□□ 0.43
Col4a1P02463 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col4a1P02463 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Col4a1P02463 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col4a1P02463 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC17.75■□□□□ 0.43
Col4a1P02463 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col4a1P02463 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col4a1P02463 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col4a1P02463 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col4a1P02463 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Col4a1P02463 Gm7446-201ENSMUST00000221035 1240 ntBASIC17.74■□□□□ 0.43
Col4a1P02463 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col4a1P02463 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Col4a1P02463 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col4a1P02463 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col4a1P02463 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Col4a1P02463 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col4a1P02463 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col4a1P02463 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Col4a1P02463 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col4a1P02463 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col4a1P02463 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col4a1P02463 Gm11425-201ENSMUST00000119608 498 ntBASIC17.74■□□□□ 0.43
Col4a1P02463 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col4a1P02463 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col4a1P02463 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Col4a1P02463 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Col4a1P02463 Gm6283-201ENSMUST00000182369 1000 ntBASIC17.74■□□□□ 0.43
Col4a1P02463 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC17.74■□□□□ 0.43
Col4a1P02463 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC17.74■□□□□ 0.43
Col4a1P02463 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Col4a1P02463 AC154687.2-201ENSMUST00000223853 640 ntBASIC17.74■□□□□ 0.43
Col4a1P02463 Gm9396-201ENSMUST00000076703 567 ntBASIC17.74■□□□□ 0.43
Col4a1P02463 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col4a1P02463 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col4a1P02463 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col4a1P02463 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Col4a1P02463 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC17.73■□□□□ 0.43
Col4a1P02463 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col4a1P02463 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col4a1P02463 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col4a1P02463 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col4a1P02463 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Col4a1P02463 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Col4a1P02463 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Col4a1P02463 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col4a1P02463 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col4a1P02463 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Col4a1P02463 Gm12390-201ENSMUST00000117897 397 ntBASIC17.73■□□□□ 0.43
Col4a1P02463 Gm15806-201ENSMUST00000120696 955 ntBASIC17.73■□□□□ 0.43
Col4a1P02463 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Col4a1P02463 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC17.73■□□□□ 0.43
Col4a1P02463 Gm37714-201ENSMUST00000194742 342 ntBASIC17.73■□□□□ 0.43
Col4a1P02463 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col4a1P02463 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Col4a1P02463 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col4a1P02463 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col4a1P02463 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Col4a1P02463 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col4a1P02463 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Col4a1P02463 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC17.72■□□□□ 0.43
Col4a1P02463 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col4a1P02463 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col4a1P02463 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col4a1P02463 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Col4a1P02463 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Col4a1P02463 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col4a1P02463 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC17.72■□□□□ 0.43
Col4a1P02463 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Col4a1P02463 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms