Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Syn1O88935 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC15.04■□□□□ -0
Syn1O88935 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Syn1O88935 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Syn1O88935 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Syn1O88935 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Syn1O88935 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Syn1O88935 Gm15678-201ENSMUST00000117573 960 ntBASIC15.04■□□□□ -0
Syn1O88935 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
Syn1O88935 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC15.04■□□□□ -0
Syn1O88935 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC15.04■□□□□ -0
Syn1O88935 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC15.04■□□□□ -0
Syn1O88935 Gm4959-201ENSMUST00000197271 1044 ntBASIC15.04■□□□□ -0
Syn1O88935 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Syn1O88935 CT009713.10-202ENSMUST00000225734 696 ntBASIC15.04■□□□□ -0
Syn1O88935 AC149588.3-201ENSMUST00000227515 150 ntBASIC15.04■□□□□ -0
Syn1O88935 AC140451.2-201ENSMUST00000228030 664 ntBASIC15.04■□□□□ -0
Syn1O88935 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Syn1O88935 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Syn1O88935 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Syn1O88935 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC15.04■□□□□ -0
Syn1O88935 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Syn1O88935 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Syn1O88935 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Syn1O88935 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Syn1O88935 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Syn1O88935 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Syn1O88935 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Syn1O88935 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Syn1O88935 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Syn1O88935 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Syn1O88935 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Syn1O88935 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC15.03■□□□□ -0
Syn1O88935 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Syn1O88935 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Syn1O88935 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Syn1O88935 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Syn1O88935 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Syn1O88935 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Syn1O88935 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC15.03■□□□□ -0
Syn1O88935 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Syn1O88935 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Syn1O88935 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Syn1O88935 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC15.03■□□□□ -0
Syn1O88935 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC15.03■□□□□ -0
Syn1O88935 Gm13226-201ENSMUST00000117838 404 ntBASIC15.03■□□□□ -0
Syn1O88935 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Syn1O88935 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC15.03■□□□□ -0
Syn1O88935 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC15.03■□□□□ -0
Syn1O88935 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC15.03■□□□□ -0
Syn1O88935 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Syn1O88935 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC15.03■□□□□ -0
Syn1O88935 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Syn1O88935 Gm8399-201ENSMUST00000082300 1117 ntBASIC15.03■□□□□ -0
Syn1O88935 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Syn1O88935 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Syn1O88935 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Syn1O88935 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
Syn1O88935 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Syn1O88935 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Syn1O88935 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Syn1O88935 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Syn1O88935 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Syn1O88935 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Syn1O88935 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Syn1O88935 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Syn1O88935 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Syn1O88935 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Syn1O88935 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Syn1O88935 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Syn1O88935 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC15.02■□□□□ -0
Syn1O88935 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Syn1O88935 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC15.02■□□□□ -0
Syn1O88935 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC15.02■□□□□ -0
Syn1O88935 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Syn1O88935 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC15.02■□□□□ -0
Syn1O88935 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC15.02■□□□□ -0
Syn1O88935 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Syn1O88935 Gm5479-201ENSMUST00000160578 435 ntBASIC15.02■□□□□ -0
Syn1O88935 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC15.02■□□□□ -0
Syn1O88935 Gm29310-201ENSMUST00000185468 696 ntBASIC15.02■□□□□ -0
Syn1O88935 Gm21825-201ENSMUST00000185728 696 ntBASIC15.02■□□□□ -0
Syn1O88935 Gm29109-201ENSMUST00000185895 696 ntBASIC15.02■□□□□ -0
Syn1O88935 Gm21896-201ENSMUST00000186520 696 ntBASIC15.02■□□□□ -0
Syn1O88935 Gm21873-201ENSMUST00000186728 696 ntBASIC15.02■□□□□ -0
Syn1O88935 Gm21794-201ENSMUST00000187056 696 ntBASIC15.02■□□□□ -0
Syn1O88935 Gm21880-201ENSMUST00000187275 696 ntBASIC15.02■□□□□ -0
Syn1O88935 Gm21826-201ENSMUST00000187451 696 ntBASIC15.02■□□□□ -0
Syn1O88935 Gm21198-201ENSMUST00000188393 696 ntBASIC15.02■□□□□ -0
Syn1O88935 Gm21749-201ENSMUST00000189343 696 ntBASIC15.02■□□□□ -0
Syn1O88935 Gm21901-201ENSMUST00000189568 696 ntBASIC15.02■□□□□ -0
Syn1O88935 Gm29424-201ENSMUST00000189716 696 ntBASIC15.02■□□□□ -0
Syn1O88935 Gm28599-201ENSMUST00000189838 694 ntBASIC15.02■□□□□ -0
Syn1O88935 Gm21867-201ENSMUST00000189917 696 ntBASIC15.02■□□□□ -0
Syn1O88935 Gm29269-201ENSMUST00000190087 696 ntBASIC15.02■□□□□ -0
Syn1O88935 Gm21722-201ENSMUST00000190153 696 ntBASIC15.02■□□□□ -0
Syn1O88935 Gm28423-201ENSMUST00000190701 696 ntBASIC15.02■□□□□ -0
Syn1O88935 Gm21899-201ENSMUST00000190745 696 ntBASIC15.02■□□□□ -0
Syn1O88935 Gm21910-201ENSMUST00000191163 696 ntBASIC15.02■□□□□ -0
Syn1O88935 Gm21849-201ENSMUST00000191571 696 ntBASIC15.02■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms