Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
ClppO88696 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ClppO88696 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ClppO88696 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.34□□□□□ -0.11
ClppO88696 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
ClppO88696 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
ClppO88696 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ClppO88696 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
ClppO88696 Gm12500-202ENSMUST00000186471 2428 ntBASIC14.34□□□□□ -0.11
ClppO88696 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC14.34□□□□□ -0.11
ClppO88696 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ClppO88696 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ClppO88696 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ClppO88696 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
ClppO88696 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC14.34□□□□□ -0.11
ClppO88696 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
ClppO88696 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ClppO88696 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC14.34□□□□□ -0.11
ClppO88696 Gm10499-201ENSMUST00000174094 934 ntBASIC14.34□□□□□ -0.11
ClppO88696 Gm18889-201ENSMUST00000174284 929 ntBASIC14.34□□□□□ -0.11
ClppO88696 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ClppO88696 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC14.34□□□□□ -0.11
ClppO88696 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ClppO88696 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
ClppO88696 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
ClppO88696 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ClppO88696 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ClppO88696 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
ClppO88696 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
ClppO88696 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ClppO88696 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ClppO88696 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ClppO88696 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
ClppO88696 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
ClppO88696 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC14.34□□□□□ -0.11
ClppO88696 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ClppO88696 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
ClppO88696 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
ClppO88696 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
ClppO88696 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
ClppO88696 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
ClppO88696 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
ClppO88696 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.11
ClppO88696 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
ClppO88696 Gm12620-201ENSMUST00000119791 1986 ntBASIC14.33□□□□□ -0.12
ClppO88696 Gm12612-201ENSMUST00000140182 1986 ntBASIC14.33□□□□□ -0.12
ClppO88696 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC14.33□□□□□ -0.12
ClppO88696 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
ClppO88696 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ClppO88696 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
ClppO88696 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ClppO88696 AC126250.1-201ENSMUST00000228343 1768 ntBASIC14.33□□□□□ -0.12
ClppO88696 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC14.33□□□□□ -0.12
ClppO88696 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC14.33□□□□□ -0.12
ClppO88696 Gm16198-201ENSMUST00000118766 670 ntBASIC14.33□□□□□ -0.12
ClppO88696 Gm11745-201ENSMUST00000121669 448 ntBASIC14.33□□□□□ -0.12
ClppO88696 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC14.33□□□□□ -0.12
ClppO88696 Gm18737-201ENSMUST00000173594 937 ntBASIC14.33□□□□□ -0.12
ClppO88696 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC14.33□□□□□ -0.12
ClppO88696 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC14.33□□□□□ -0.12
ClppO88696 Gm44335-201ENSMUST00000196879 141 ntBASIC14.33□□□□□ -0.12
ClppO88696 Gm44297-201ENSMUST00000198304 141 ntBASIC14.33□□□□□ -0.12
ClppO88696 Gm44346-201ENSMUST00000198851 141 ntBASIC14.33□□□□□ -0.12
ClppO88696 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
ClppO88696 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC14.33□□□□□ -0.12
ClppO88696 Gm18057-201ENSMUST00000208220 503 ntBASIC14.33□□□□□ -0.12
ClppO88696 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
ClppO88696 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC14.33□□□□□ -0.12
ClppO88696 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ClppO88696 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC14.33□□□□□ -0.12
ClppO88696 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ClppO88696 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
ClppO88696 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ClppO88696 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
ClppO88696 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC14.33□□□□□ -0.12
ClppO88696 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
ClppO88696 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ClppO88696 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ClppO88696 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.33□□□□□ -0.12
ClppO88696 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ClppO88696 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ClppO88696 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ClppO88696 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ClppO88696 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
ClppO88696 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ClppO88696 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ClppO88696 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ClppO88696 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ClppO88696 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC14.33□□□□□ -0.12
ClppO88696 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ClppO88696 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
ClppO88696 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ClppO88696 Gm42748-201ENSMUST00000199354 2341 ntBASIC14.32□□□□□ -0.12
ClppO88696 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
ClppO88696 AC025913.2-201ENSMUST00000220136 1766 ntBASIC14.32□□□□□ -0.12
ClppO88696 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
ClppO88696 Matn2-206ENSMUST00000228570 2798 ntBASIC14.32□□□□□ -0.12
ClppO88696 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ClppO88696 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
ClppO88696 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms