Protein–RNA interactions for Protein: O88384

Vti1b, Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1bO88384 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vti1bO88384 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Vti1bO88384 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vti1bO88384 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vti1bO88384 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC14.01□□□□□ -0.17
Vti1bO88384 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vti1bO88384 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vti1bO88384 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Vti1bO88384 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC14.01□□□□□ -0.17
Vti1bO88384 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Vti1bO88384 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vti1bO88384 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vti1bO88384 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Vti1bO88384 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC14□□□□□ -0.17
Vti1bO88384 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vti1bO88384 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vti1bO88384 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vti1bO88384 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vti1bO88384 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC14□□□□□ -0.17
Vti1bO88384 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vti1bO88384 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC14□□□□□ -0.17
Vti1bO88384 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vti1bO88384 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vti1bO88384 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC14□□□□□ -0.17
Vti1bO88384 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC14□□□□□ -0.17
Vti1bO88384 Gm18733-201ENSMUST00000173950 856 ntBASIC14□□□□□ -0.17
Vti1bO88384 Mir5126-201ENSMUST00000175513 77 ntBASIC14□□□□□ -0.17
Vti1bO88384 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC14□□□□□ -0.17
Vti1bO88384 Gm5253-201ENSMUST00000187104 1025 ntBASIC14□□□□□ -0.17
Vti1bO88384 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC14□□□□□ -0.17
Vti1bO88384 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC14□□□□□ -0.17
Vti1bO88384 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vti1bO88384 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vti1bO88384 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14□□□□□ -0.17
Vti1bO88384 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC14□□□□□ -0.17
Vti1bO88384 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Vti1bO88384 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Vti1bO88384 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vti1bO88384 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vti1bO88384 Nupl1-207ENSMUST00000225311 2475 ntBASIC14□□□□□ -0.17
Vti1bO88384 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Vti1bO88384 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Vti1bO88384 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC14□□□□□ -0.17
Vti1bO88384 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vti1bO88384 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vti1bO88384 AC157650.3-201ENSMUST00000225058 1476 ntBASIC13.99□□□□□ -0.17
Vti1bO88384 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vti1bO88384 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Vti1bO88384 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vti1bO88384 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vti1bO88384 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vti1bO88384 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vti1bO88384 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vti1bO88384 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Vti1bO88384 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Vti1bO88384 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Vti1bO88384 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC13.99□□□□□ -0.17
Vti1bO88384 Gm13036-201ENSMUST00000117799 748 ntBASIC13.99□□□□□ -0.17
Vti1bO88384 Gm12350-201ENSMUST00000121208 462 ntBASIC13.99□□□□□ -0.17
Vti1bO88384 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Vti1bO88384 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC13.99□□□□□ -0.17
Vti1bO88384 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC13.99□□□□□ -0.17
Vti1bO88384 Gm7556-201ENSMUST00000201178 1084 ntBASIC13.99□□□□□ -0.17
Vti1bO88384 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vti1bO88384 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC13.99□□□□□ -0.17
Vti1bO88384 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vti1bO88384 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Vti1bO88384 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Vti1bO88384 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Vti1bO88384 AC162938.1-201ENSMUST00000213140 2323 ntBASIC13.99□□□□□ -0.17
Vti1bO88384 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vti1bO88384 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vti1bO88384 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vti1bO88384 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vti1bO88384 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vti1bO88384 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Vti1bO88384 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vti1bO88384 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Vti1bO88384 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Vti1bO88384 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vti1bO88384 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC13.99□□□□□ -0.17
Vti1bO88384 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vti1bO88384 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Vti1bO88384 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vti1bO88384 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vti1bO88384 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Vti1bO88384 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vti1bO88384 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vti1bO88384 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Vti1bO88384 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Vti1bO88384 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC13.98□□□□□ -0.17
Vti1bO88384 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vti1bO88384 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC13.98□□□□□ -0.17
Vti1bO88384 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vti1bO88384 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vti1bO88384 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vti1bO88384 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Vti1bO88384 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC13.98□□□□□ -0.17
Vti1bO88384 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC13.98□□□□□ -0.17
Vti1bO88384 Gm9682-201ENSMUST00000197505 556 ntBASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms