Protein–RNA interactions for Protein: O88253

Gm10226, Mszf39 (Fragment), mousemouse

Predictions only

Length 85 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10226O88253 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Gm10226O88253 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Gm10226O88253 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Gm10226O88253 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Gm10226O88253 Gm42632-201ENSMUST00000201707 2411 ntBASIC11.29□□□□□ -0.6
Gm10226O88253 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Gm10226O88253 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Gm10226O88253 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Gm10226O88253 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Gm10226O88253 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Gm10226O88253 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC11.29□□□□□ -0.6
Gm10226O88253 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Gm10226O88253 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Gm10226O88253 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Gm10226O88253 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Gm10226O88253 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC11.29□□□□□ -0.6
Gm10226O88253 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Gm10226O88253 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Gm10226O88253 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Gm10226O88253 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC11.29□□□□□ -0.6
Gm10226O88253 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC11.29□□□□□ -0.6
Gm10226O88253 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC11.29□□□□□ -0.6
Gm10226O88253 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Gm10226O88253 Gm9719-201ENSMUST00000162765 543 ntBASIC11.29□□□□□ -0.6
Gm10226O88253 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Gm10226O88253 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Gm10226O88253 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC11.29□□□□□ -0.6
Gm10226O88253 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC11.29□□□□□ -0.6
Gm10226O88253 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Gm10226O88253 AC126408.1-201ENSMUST00000225184 523 ntBASIC11.29□□□□□ -0.6
Gm10226O88253 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Gm10226O88253 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Gm10226O88253 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Gm10226O88253 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Gm10226O88253 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Gm10226O88253 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC11.29□□□□□ -0.6
Gm10226O88253 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Gm10226O88253 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Gm10226O88253 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Gm10226O88253 Gm45212-201ENSMUST00000205831 3403 ntBASIC11.29□□□□□ -0.6
Gm10226O88253 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Gm10226O88253 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC11.29□□□□□ -0.6
Gm10226O88253 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Gm10226O88253 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Gm10226O88253 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Gm10226O88253 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Gm10226O88253 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Gm10226O88253 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Gm10226O88253 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Gm10226O88253 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Gm10226O88253 Gm9252-201ENSMUST00000172364 1602 ntBASIC11.28□□□□□ -0.6
Gm10226O88253 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
Gm10226O88253 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Gm10226O88253 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC11.28□□□□□ -0.6
Gm10226O88253 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC11.28□□□□□ -0.6
Gm10226O88253 Gm5566-201ENSMUST00000116118 459 ntBASIC11.28□□□□□ -0.6
Gm10226O88253 Gm6222-201ENSMUST00000120787 396 ntBASIC11.28□□□□□ -0.6
Gm10226O88253 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Gm10226O88253 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Gm10226O88253 Gm37277-201ENSMUST00000194052 1111 ntBASIC11.28□□□□□ -0.6
Gm10226O88253 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Gm10226O88253 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Gm10226O88253 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Gm10226O88253 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Gm10226O88253 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC11.28□□□□□ -0.6
Gm10226O88253 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Gm10226O88253 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Gm10226O88253 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Gm10226O88253 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Gm10226O88253 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Gm10226O88253 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Gm10226O88253 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Gm10226O88253 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Gm10226O88253 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Gm10226O88253 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Gm10226O88253 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Gm10226O88253 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Gm10226O88253 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Gm10226O88253 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Gm10226O88253 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Gm10226O88253 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Gm10226O88253 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Gm10226O88253 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Gm10226O88253 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Gm10226O88253 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gm10226O88253 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Gm10226O88253 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Gm10226O88253 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gm10226O88253 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC11.27□□□□□ -0.61
Gm10226O88253 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gm10226O88253 Gm14042-201ENSMUST00000120139 833 ntBASIC11.27□□□□□ -0.61
Gm10226O88253 Gm10275-202ENSMUST00000168697 495 ntBASIC11.27□□□□□ -0.61
Gm10226O88253 Auts2-212ENSMUST00000178555 309 ntBASIC11.27□□□□□ -0.61
Gm10226O88253 Gm27618-201ENSMUST00000183671 60 ntBASIC11.27□□□□□ -0.61
Gm10226O88253 Gm27622-201ENSMUST00000183779 60 ntBASIC11.27□□□□□ -0.61
Gm10226O88253 Gm10576-201ENSMUST00000191927 825 ntBASIC11.27□□□□□ -0.61
Gm10226O88253 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gm10226O88253 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gm10226O88253 Gm10275-201ENSMUST00000092620 635 ntBASIC11.27□□□□□ -0.61
Gm10226O88253 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms