Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ubr1O70481 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ubr1O70481 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ubr1O70481 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ubr1O70481 Gm42471-201ENSMUST00000201457 1865 ntBASIC18.72■□□□□ 0.59
Ubr1O70481 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC18.72■□□□□ 0.59
Ubr1O70481 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ubr1O70481 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Ubr1O70481 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ubr1O70481 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ubr1O70481 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ubr1O70481 Gm12390-201ENSMUST00000117897 397 ntBASIC18.72■□□□□ 0.59
Ubr1O70481 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC18.72■□□□□ 0.59
Ubr1O70481 Gm18307-201ENSMUST00000206864 949 ntBASIC18.72■□□□□ 0.59
Ubr1O70481 AC166349.1-201ENSMUST00000220866 695 ntBASIC18.72■□□□□ 0.59
Ubr1O70481 Gm7446-201ENSMUST00000221035 1240 ntBASIC18.72■□□□□ 0.59
Ubr1O70481 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ubr1O70481 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ubr1O70481 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ubr1O70481 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ubr1O70481 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ubr1O70481 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ubr1O70481 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ubr1O70481 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ubr1O70481 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ubr1O70481 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Ubr1O70481 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ubr1O70481 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Ubr1O70481 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ubr1O70481 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ubr1O70481 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ubr1O70481 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ubr1O70481 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC18.71■□□□□ 0.59
Ubr1O70481 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ubr1O70481 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC18.71■□□□□ 0.59
Ubr1O70481 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ubr1O70481 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ubr1O70481 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Ubr1O70481 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ubr1O70481 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ubr1O70481 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ubr1O70481 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ubr1O70481 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC18.71■□□□□ 0.59
Ubr1O70481 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ubr1O70481 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ubr1O70481 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Ubr1O70481 Gm13689-201ENSMUST00000119360 685 ntBASIC18.7■□□□□ 0.58
Ubr1O70481 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ubr1O70481 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC18.7■□□□□ 0.58
Ubr1O70481 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC18.7■□□□□ 0.58
Ubr1O70481 AC155729.1-201ENSMUST00000227758 544 ntBASIC18.7■□□□□ 0.58
Ubr1O70481 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ubr1O70481 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ubr1O70481 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ubr1O70481 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ubr1O70481 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ubr1O70481 AC168058.1-201ENSMUST00000219521 2282 ntBASIC18.7■□□□□ 0.58
Ubr1O70481 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Ubr1O70481 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ubr1O70481 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ubr1O70481 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ubr1O70481 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ubr1O70481 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ubr1O70481 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ubr1O70481 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ubr1O70481 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ubr1O70481 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC18.7■□□□□ 0.58
Ubr1O70481 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ubr1O70481 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ubr1O70481 Gm13385-201ENSMUST00000121089 220 ntBASIC18.7■□□□□ 0.58
Ubr1O70481 Gm18905-201ENSMUST00000205454 928 ntBASIC18.7■□□□□ 0.58
Ubr1O70481 AC155258.1-201ENSMUST00000219303 253 ntBASIC18.7■□□□□ 0.58
Ubr1O70481 Gm9899-201ENSMUST00000065519 555 ntBASIC18.7■□□□□ 0.58
Ubr1O70481 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ubr1O70481 Gm8775-201ENSMUST00000170943 1327 ntBASIC18.7■□□□□ 0.58
Ubr1O70481 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ubr1O70481 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ubr1O70481 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC18.7■□□□□ 0.58
Ubr1O70481 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ubr1O70481 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
Ubr1O70481 Efs-202ENSMUST00000227037 2540 ntBASIC18.69■□□□□ 0.58
Ubr1O70481 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ubr1O70481 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ubr1O70481 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ubr1O70481 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ubr1O70481 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
Ubr1O70481 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ubr1O70481 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC18.69■□□□□ 0.58
Ubr1O70481 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC18.69■□□□□ 0.58
Ubr1O70481 AC153962.4-201ENSMUST00000217878 242 ntBASIC18.69■□□□□ 0.58
Ubr1O70481 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ubr1O70481 AC149294.4-201ENSMUST00000227870 882 ntBASIC18.69■□□□□ 0.58
Ubr1O70481 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ubr1O70481 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Ubr1O70481 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC18.69■□□□□ 0.58
Ubr1O70481 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ubr1O70481 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ubr1O70481 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ubr1O70481 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ubr1O70481 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms