Protein–RNA interactions for Protein: O55240

Rdh5, 11-cis retinol dehydrogenase, mousemouse

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh5O55240 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Rdh5O55240 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rdh5O55240 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC13.9□□□□□ -0.19
Rdh5O55240 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Rdh5O55240 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rdh5O55240 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Rdh5O55240 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rdh5O55240 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rdh5O55240 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rdh5O55240 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rdh5O55240 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rdh5O55240 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC13.89□□□□□ -0.19
Rdh5O55240 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rdh5O55240 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rdh5O55240 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Rdh5O55240 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Rdh5O55240 Gm13464-201ENSMUST00000119418 935 ntBASIC13.89□□□□□ -0.19
Rdh5O55240 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Rdh5O55240 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Rdh5O55240 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rdh5O55240 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC13.89□□□□□ -0.19
Rdh5O55240 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Rdh5O55240 AC154572.2-201ENSMUST00000225105 997 ntBASIC13.89□□□□□ -0.19
Rdh5O55240 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rdh5O55240 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC13.89□□□□□ -0.19
Rdh5O55240 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Rdh5O55240 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rdh5O55240 Gm5421-201ENSMUST00000181698 2354 ntBASIC13.89□□□□□ -0.19
Rdh5O55240 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Rdh5O55240 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rdh5O55240 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC13.89□□□□□ -0.19
Rdh5O55240 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rdh5O55240 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Rdh5O55240 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rdh5O55240 Gm13410-201ENSMUST00000117058 1415 ntBASIC13.89□□□□□ -0.19
Rdh5O55240 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Rdh5O55240 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rdh5O55240 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rdh5O55240 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rdh5O55240 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rdh5O55240 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rdh5O55240 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rdh5O55240 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC13.88□□□□□ -0.19
Rdh5O55240 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rdh5O55240 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rdh5O55240 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rdh5O55240 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Rdh5O55240 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rdh5O55240 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rdh5O55240 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rdh5O55240 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Rdh5O55240 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rdh5O55240 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Rdh5O55240 Gm12134-201ENSMUST00000122109 520 ntBASIC13.88□□□□□ -0.19
Rdh5O55240 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC13.88□□□□□ -0.19
Rdh5O55240 Bloc1s5-203ENSMUST00000224902 612 ntBASIC13.88□□□□□ -0.19
Rdh5O55240 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rdh5O55240 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rdh5O55240 Gm10175-201ENSMUST00000086013 645 ntBASIC13.88□□□□□ -0.19
Rdh5O55240 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC13.88□□□□□ -0.19
Rdh5O55240 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Rdh5O55240 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rdh5O55240 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Rdh5O55240 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Rdh5O55240 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Rdh5O55240 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rdh5O55240 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rdh5O55240 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rdh5O55240 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rdh5O55240 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rdh5O55240 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rdh5O55240 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rdh5O55240 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Rdh5O55240 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rdh5O55240 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Rdh5O55240 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC13.87□□□□□ -0.19
Rdh5O55240 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rdh5O55240 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rdh5O55240 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rdh5O55240 Tcf21-202ENSMUST00000218002 1788 ntBASIC13.87□□□□□ -0.19
Rdh5O55240 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Rdh5O55240 Gm23935-201ENSMUST00000102303 57 ntBASIC13.87□□□□□ -0.19
Rdh5O55240 Gm24270-201ENSMUST00000102326 57 ntBASIC13.87□□□□□ -0.19
Rdh5O55240 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC13.87□□□□□ -0.19
Rdh5O55240 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rdh5O55240 Gm4995-201ENSMUST00000117247 432 ntBASIC13.87□□□□□ -0.19
Rdh5O55240 Gm9385-201ENSMUST00000117563 472 ntBASIC13.87□□□□□ -0.19
Rdh5O55240 Gm8749-201ENSMUST00000117737 331 ntBASIC13.87□□□□□ -0.19
Rdh5O55240 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Rdh5O55240 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Rdh5O55240 Gm24245-201ENSMUST00000157318 57 ntBASIC13.87□□□□□ -0.19
Rdh5O55240 Gm9726-201ENSMUST00000180321 678 ntBASIC13.87□□□□□ -0.19
Rdh5O55240 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Rdh5O55240 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rdh5O55240 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rdh5O55240 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rdh5O55240 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rdh5O55240 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
Rdh5O55240 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rdh5O55240 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms