Protein–RNA interactions for Protein: O55029

Copb2, Coatomer subunit beta', mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Copb2O55029 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Copb2O55029 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Copb2O55029 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Copb2O55029 Gm6539-201ENSMUST00000119157 1064 ntBASIC16.84■□□□□ 0.29
Copb2O55029 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Copb2O55029 Gm6944-201ENSMUST00000182449 1006 ntBASIC16.84■□□□□ 0.29
Copb2O55029 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC16.84■□□□□ 0.29
Copb2O55029 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC16.84■□□□□ 0.29
Copb2O55029 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Copb2O55029 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Copb2O55029 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC16.84■□□□□ 0.29
Copb2O55029 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Copb2O55029 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Copb2O55029 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC16.84■□□□□ 0.29
Copb2O55029 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Copb2O55029 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Copb2O55029 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Copb2O55029 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Copb2O55029 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Copb2O55029 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Copb2O55029 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Copb2O55029 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC16.84■□□□□ 0.29
Copb2O55029 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC16.84■□□□□ 0.29
Copb2O55029 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Copb2O55029 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Copb2O55029 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Copb2O55029 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Copb2O55029 Gm37305-201ENSMUST00000195714 4279 ntBASIC16.83■□□□□ 0.29
Copb2O55029 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Copb2O55029 Gm12428-201ENSMUST00000119844 727 ntBASIC16.83■□□□□ 0.28
Copb2O55029 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Copb2O55029 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC16.83■□□□□ 0.28
Copb2O55029 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Copb2O55029 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Copb2O55029 Gm27306-201ENSMUST00000183970 107 ntBASIC16.83■□□□□ 0.28
Copb2O55029 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC16.83■□□□□ 0.28
Copb2O55029 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC16.83■□□□□ 0.28
Copb2O55029 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC16.83■□□□□ 0.28
Copb2O55029 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Copb2O55029 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Copb2O55029 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Copb2O55029 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Copb2O55029 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Copb2O55029 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Copb2O55029 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Copb2O55029 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Copb2O55029 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Copb2O55029 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Copb2O55029 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Copb2O55029 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC16.83■□□□□ 0.28
Copb2O55029 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Copb2O55029 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Copb2O55029 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Copb2O55029 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.82■□□□□ 0.28
Copb2O55029 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC16.82■□□□□ 0.28
Copb2O55029 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Copb2O55029 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Copb2O55029 AC154412.1-201ENSMUST00000226540 2786 ntBASIC16.82■□□□□ 0.28
Copb2O55029 Gm8749-201ENSMUST00000117737 331 ntBASIC16.82■□□□□ 0.28
Copb2O55029 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC16.82■□□□□ 0.28
Copb2O55029 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Copb2O55029 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Copb2O55029 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Copb2O55029 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Copb2O55029 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Copb2O55029 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Copb2O55029 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Copb2O55029 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Copb2O55029 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Copb2O55029 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Copb2O55029 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Copb2O55029 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Copb2O55029 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC16.81■□□□□ 0.28
Copb2O55029 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Copb2O55029 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Copb2O55029 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC16.81■□□□□ 0.28
Copb2O55029 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Copb2O55029 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Copb2O55029 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Copb2O55029 Gm25144-201ENSMUST00000179561 110 ntBASIC16.81■□□□□ 0.28
Copb2O55029 Gm25352-201ENSMUST00000179815 110 ntBASIC16.81■□□□□ 0.28
Copb2O55029 Gm27533-201ENSMUST00000183800 152 ntBASIC16.81■□□□□ 0.28
Copb2O55029 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC16.81■□□□□ 0.28
Copb2O55029 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Copb2O55029 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Copb2O55029 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Copb2O55029 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Copb2O55029 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Copb2O55029 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Copb2O55029 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Copb2O55029 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Copb2O55029 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Copb2O55029 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Copb2O55029 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Copb2O55029 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC16.8■□□□□ 0.28
Copb2O55029 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Copb2O55029 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Copb2O55029 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
Copb2O55029 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Copb2O55029 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms