Protein–RNA interactions for Protein: O54908

Dkk1, Dickkopf-related protein 1, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dkk1O54908 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Dkk1O54908 Gm11342-203ENSMUST00000224879 1324 ntBASIC13.2□□□□□ -0.3
Dkk1O54908 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Dkk1O54908 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC13.2□□□□□ -0.3
Dkk1O54908 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Dkk1O54908 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Dkk1O54908 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Dkk1O54908 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Dkk1O54908 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Dkk1O54908 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC13.2□□□□□ -0.3
Dkk1O54908 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Dkk1O54908 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Dkk1O54908 B230110C06Rik-202ENSMUST00000181936 938 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Dkk1O54908 Gm21542-201ENSMUST00000182307 993 ntBASIC13.2□□□□□ -0.3
Dkk1O54908 Gm28065-201ENSMUST00000185290 833 ntTSL 3 BASIC13.2□□□□□ -0.3
Dkk1O54908 Gm5253-201ENSMUST00000187104 1025 ntBASIC13.2□□□□□ -0.3
Dkk1O54908 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC13.2□□□□□ -0.3
Dkk1O54908 Gm43774-201ENSMUST00000196327 878 ntBASIC13.2□□□□□ -0.3
Dkk1O54908 AC084391.1-201ENSMUST00000200651 141 ntBASIC13.2□□□□□ -0.3
Dkk1O54908 Gm7556-201ENSMUST00000201178 1084 ntBASIC13.2□□□□□ -0.3
Dkk1O54908 Gm44799-201ENSMUST00000207639 1202 ntBASIC13.2□□□□□ -0.3
Dkk1O54908 Gm45258-201ENSMUST00000210042 853 ntBASIC13.2□□□□□ -0.3
Dkk1O54908 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Dkk1O54908 Gm6657-204ENSMUST00000211288 1091 ntAPPRIS P5 TSL 5 BASIC13.2□□□□□ -0.3
Dkk1O54908 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Dkk1O54908 4930543K20Rik-201ENSMUST00000217044 355 ntBASIC13.2□□□□□ -0.3
Dkk1O54908 AC140293.1-201ENSMUST00000225626 1247 ntBASIC13.2□□□□□ -0.3
Dkk1O54908 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Dkk1O54908 Vmn1r76-201ENSMUST00000058772 975 ntAPPRIS P2 BASIC13.2□□□□□ -0.3
Dkk1O54908 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Dkk1O54908 AC157650.3-201ENSMUST00000225058 1476 ntBASIC13.2□□□□□ -0.3
Dkk1O54908 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC13.2□□□□□ -0.3
Dkk1O54908 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Dkk1O54908 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Dkk1O54908 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Dkk1O54908 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Dkk1O54908 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Dkk1O54908 Ucp1-201ENSMUST00000034146 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Dkk1O54908 Asic1-205ENSMUST00000228185 1818 ntBASIC13.2□□□□□ -0.3
Dkk1O54908 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Dkk1O54908 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Dkk1O54908 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
Dkk1O54908 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Dkk1O54908 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Dkk1O54908 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Dkk1O54908 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Dkk1O54908 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Dkk1O54908 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Dkk1O54908 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Dkk1O54908 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Dkk1O54908 Zkscan3-208ENSMUST00000224820 5398 ntBASIC13.19□□□□□ -0.3
Dkk1O54908 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Dkk1O54908 Mndal-204ENSMUST00000188804 2026 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Dkk1O54908 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC13.19□□□□□ -0.3
Dkk1O54908 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Dkk1O54908 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Dkk1O54908 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Dkk1O54908 Gm24374-201ENSMUST00000104394 106 ntBASIC13.19□□□□□ -0.3
Dkk1O54908 Serpina3a-202ENSMUST00000109965 1204 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Dkk1O54908 Gm13438-201ENSMUST00000120100 573 ntBASIC13.19□□□□□ -0.3
Dkk1O54908 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC13.19□□□□□ -0.3
Dkk1O54908 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Dkk1O54908 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Dkk1O54908 Vmn2r-ps118-201ENSMUST00000176785 908 ntBASIC13.19□□□□□ -0.3
Dkk1O54908 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC13.19□□□□□ -0.3
Dkk1O54908 Gm27209-201ENSMUST00000183834 898 ntTSL 3 BASIC13.19□□□□□ -0.3
Dkk1O54908 Gm43138-201ENSMUST00000199123 708 ntBASIC13.19□□□□□ -0.3
Dkk1O54908 Gm30708-201ENSMUST00000202183 312 ntBASIC13.19□□□□□ -0.3
Dkk1O54908 Gm31763-201ENSMUST00000217788 673 ntTSL 3 BASIC13.19□□□□□ -0.3
Dkk1O54908 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Dkk1O54908 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Dkk1O54908 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Dkk1O54908 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Dkk1O54908 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Dkk1O54908 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Dkk1O54908 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Dkk1O54908 Gm5403-201ENSMUST00000117105 2795 ntBASIC13.19□□□□□ -0.3
Dkk1O54908 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Dkk1O54908 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Dkk1O54908 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Dkk1O54908 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Dkk1O54908 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Dkk1O54908 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC13.18□□□□□ -0.3
Dkk1O54908 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Dkk1O54908 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Dkk1O54908 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Dkk1O54908 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Dkk1O54908 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Dkk1O54908 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Dkk1O54908 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Dkk1O54908 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Dkk1O54908 Eqtn-202ENSMUST00000107097 1164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Dkk1O54908 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Dkk1O54908 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC13.18□□□□□ -0.3
Dkk1O54908 Gm5909-201ENSMUST00000119768 1281 ntBASIC13.18□□□□□ -0.3
Dkk1O54908 Gm12637-201ENSMUST00000130501 368 ntTSL 3 BASIC13.18□□□□□ -0.3
Dkk1O54908 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC13.18□□□□□ -0.3
Dkk1O54908 B230110C06Rik-201ENSMUST00000181388 1274 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Dkk1O54908 Gm27025-201ENSMUST00000182392 942 ntBASIC13.18□□□□□ -0.3
Dkk1O54908 Gm29286-202ENSMUST00000187736 537 ntTSL 5 BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms