Protein–RNA interactions for Protein: O54785

Limk2, LIM domain kinase 2, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk2O54785 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Limk2O54785 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Limk2O54785 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Limk2O54785 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC14.87□□□□□ -0.03
Limk2O54785 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Limk2O54785 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Limk2O54785 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Limk2O54785 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC14.87□□□□□ -0.03
Limk2O54785 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Limk2O54785 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Limk2O54785 Gm27430-201ENSMUST00000184585 107 ntBASIC14.87□□□□□ -0.03
Limk2O54785 Gm44333-201ENSMUST00000197168 107 ntBASIC14.87□□□□□ -0.03
Limk2O54785 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Limk2O54785 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Limk2O54785 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Limk2O54785 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Limk2O54785 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Limk2O54785 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Limk2O54785 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Limk2O54785 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Limk2O54785 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Limk2O54785 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.87□□□□□ -0.03
Limk2O54785 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Limk2O54785 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Limk2O54785 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Limk2O54785 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Limk2O54785 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Limk2O54785 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Limk2O54785 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Limk2O54785 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
Limk2O54785 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Limk2O54785 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Limk2O54785 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Limk2O54785 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Limk2O54785 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Limk2O54785 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Limk2O54785 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Limk2O54785 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Limk2O54785 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Limk2O54785 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Limk2O54785 Gm7774-201ENSMUST00000200064 533 ntBASIC14.86□□□□□ -0.03
Limk2O54785 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Limk2O54785 Olfr286-202ENSMUST00000205305 969 ntBASIC14.86□□□□□ -0.03
Limk2O54785 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Limk2O54785 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Limk2O54785 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
Limk2O54785 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Limk2O54785 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Limk2O54785 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Limk2O54785 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Limk2O54785 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC14.86□□□□□ -0.03
Limk2O54785 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Limk2O54785 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.86□□□□□ -0.03
Limk2O54785 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Limk2O54785 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Limk2O54785 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Limk2O54785 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Limk2O54785 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Limk2O54785 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Limk2O54785 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Limk2O54785 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Limk2O54785 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Limk2O54785 Fbxl12-205ENSMUST00000140702 1555 ntBASIC14.85□□□□□ -0.03
Limk2O54785 Nudt18-203ENSMUST00000228768 1578 ntBASIC14.85□□□□□ -0.03
Limk2O54785 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Limk2O54785 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Limk2O54785 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Limk2O54785 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC14.85□□□□□ -0.03
Limk2O54785 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC14.85□□□□□ -0.03
Limk2O54785 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Limk2O54785 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Limk2O54785 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC14.85□□□□□ -0.03
Limk2O54785 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC14.85□□□□□ -0.03
Limk2O54785 Gm15483-201ENSMUST00000120338 456 ntBASIC14.85□□□□□ -0.03
Limk2O54785 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC14.85□□□□□ -0.03
Limk2O54785 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Limk2O54785 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
Limk2O54785 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC14.85□□□□□ -0.03
Limk2O54785 Gm10253-201ENSMUST00000194270 940 ntBASIC14.85□□□□□ -0.03
Limk2O54785 Gm18057-201ENSMUST00000208220 503 ntBASIC14.85□□□□□ -0.03
Limk2O54785 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC14.85□□□□□ -0.03
Limk2O54785 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Limk2O54785 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
Limk2O54785 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Limk2O54785 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Limk2O54785 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Limk2O54785 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Limk2O54785 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Limk2O54785 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Limk2O54785 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Limk2O54785 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Limk2O54785 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Limk2O54785 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Limk2O54785 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
Limk2O54785 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Limk2O54785 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Limk2O54785 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Limk2O54785 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC14.84□□□□□ -0.03
Limk2O54785 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Limk2O54785 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 10 ms