Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Efnb3O35393 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
Efnb3O35393 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Efnb3O35393 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Efnb3O35393 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Efnb3O35393 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Efnb3O35393 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Efnb3O35393 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Efnb3O35393 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC11.61□□□□□ -0.55
Efnb3O35393 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Efnb3O35393 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Efnb3O35393 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Efnb3O35393 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC11.61□□□□□ -0.55
Efnb3O35393 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Efnb3O35393 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Efnb3O35393 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Efnb3O35393 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Efnb3O35393 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC11.61□□□□□ -0.55
Efnb3O35393 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC11.61□□□□□ -0.55
Efnb3O35393 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC11.61□□□□□ -0.55
Efnb3O35393 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Efnb3O35393 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Efnb3O35393 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Efnb3O35393 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Efnb3O35393 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC11.61□□□□□ -0.55
Efnb3O35393 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Efnb3O35393 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Efnb3O35393 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Efnb3O35393 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Efnb3O35393 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Efnb3O35393 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC11.61□□□□□ -0.55
Efnb3O35393 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Efnb3O35393 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Efnb3O35393 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Efnb3O35393 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Efnb3O35393 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Efnb3O35393 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Efnb3O35393 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC11.61□□□□□ -0.55
Efnb3O35393 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC11.6□□□□□ -0.55
Efnb3O35393 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Efnb3O35393 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Efnb3O35393 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Efnb3O35393 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC11.6□□□□□ -0.55
Efnb3O35393 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC11.6□□□□□ -0.55
Efnb3O35393 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Efnb3O35393 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC11.6□□□□□ -0.55
Efnb3O35393 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Efnb3O35393 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Efnb3O35393 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Efnb3O35393 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Efnb3O35393 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Efnb3O35393 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC11.6□□□□□ -0.55
Efnb3O35393 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Efnb3O35393 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC11.6□□□□□ -0.55
Efnb3O35393 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Efnb3O35393 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Efnb3O35393 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC11.6□□□□□ -0.55
Efnb3O35393 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Efnb3O35393 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Efnb3O35393 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Efnb3O35393 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Efnb3O35393 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Efnb3O35393 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Efnb3O35393 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Efnb3O35393 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Efnb3O35393 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Efnb3O35393 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Efnb3O35393 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Efnb3O35393 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Efnb3O35393 Gm42471-201ENSMUST00000201457 1865 ntBASIC11.59□□□□□ -0.55
Efnb3O35393 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC11.59□□□□□ -0.55
Efnb3O35393 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC11.59□□□□□ -0.55
Efnb3O35393 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Efnb3O35393 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC11.59□□□□□ -0.55
Efnb3O35393 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Efnb3O35393 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Efnb3O35393 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Efnb3O35393 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Efnb3O35393 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Efnb3O35393 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Efnb3O35393 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC11.59□□□□□ -0.55
Efnb3O35393 Gm11453-201ENSMUST00000117318 1007 ntBASIC11.59□□□□□ -0.55
Efnb3O35393 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC11.59□□□□□ -0.55
Efnb3O35393 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC11.59□□□□□ -0.55
Efnb3O35393 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC11.59□□□□□ -0.55
Efnb3O35393 Gm27867-201ENSMUST00000184778 125 ntBASIC11.59□□□□□ -0.55
Efnb3O35393 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC11.59□□□□□ -0.55
Efnb3O35393 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Efnb3O35393 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Efnb3O35393 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Efnb3O35393 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Efnb3O35393 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Efnb3O35393 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Efnb3O35393 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Efnb3O35393 Gm19863-201ENSMUST00000192480 2218 ntBASIC11.59□□□□□ -0.55
Efnb3O35393 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Efnb3O35393 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Efnb3O35393 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Efnb3O35393 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC11.59□□□□□ -0.55
Efnb3O35393 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms