Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 AC124549.3-201ENSMUST00000225541 367 ntBASIC13.79□□□□□ -0.2
Cx3cl1O35188 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cx3cl1O35188 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cx3cl1O35188 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cx3cl1O35188 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cx3cl1O35188 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cx3cl1O35188 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cx3cl1O35188 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC13.79□□□□□ -0.2
Cx3cl1O35188 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cx3cl1O35188 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cx3cl1O35188 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC13.79□□□□□ -0.2
Cx3cl1O35188 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cx3cl1O35188 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Cx3cl1O35188 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cx3cl1O35188 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Cx3cl1O35188 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cx3cl1O35188 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cx3cl1O35188 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cx3cl1O35188 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cx3cl1O35188 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Cx3cl1O35188 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cx3cl1O35188 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cx3cl1O35188 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cx3cl1O35188 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cx3cl1O35188 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cx3cl1O35188 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cx3cl1O35188 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC13.78□□□□□ -0.2
Cx3cl1O35188 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC13.78□□□□□ -0.2
Cx3cl1O35188 AC155252.2-201ENSMUST00000226946 680 ntBASIC13.78□□□□□ -0.2
Cx3cl1O35188 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cx3cl1O35188 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cx3cl1O35188 AC148324.1-201ENSMUST00000219034 4240 ntBASIC13.78□□□□□ -0.2
Cx3cl1O35188 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cx3cl1O35188 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cx3cl1O35188 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cx3cl1O35188 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cx3cl1O35188 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
Cx3cl1O35188 Gm21009-201ENSMUST00000197169 1669 ntBASIC13.78□□□□□ -0.2
Cx3cl1O35188 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cx3cl1O35188 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cx3cl1O35188 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cx3cl1O35188 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cx3cl1O35188 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cx3cl1O35188 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Cx3cl1O35188 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cx3cl1O35188 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Cx3cl1O35188 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC13.77□□□□□ -0.2
Cx3cl1O35188 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Cx3cl1O35188 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Cx3cl1O35188 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Cx3cl1O35188 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cx3cl1O35188 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cx3cl1O35188 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cx3cl1O35188 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cx3cl1O35188 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cx3cl1O35188 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cx3cl1O35188 Gm43575-201ENSMUST00000196420 516 ntBASIC13.77□□□□□ -0.21
Cx3cl1O35188 AC151286.1-201ENSMUST00000198489 145 ntBASIC13.77□□□□□ -0.21
Cx3cl1O35188 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cx3cl1O35188 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cx3cl1O35188 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Cx3cl1O35188 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC13.77□□□□□ -0.21
Cx3cl1O35188 CT030684.1-201ENSMUST00000227292 914 ntBASIC13.77□□□□□ -0.21
Cx3cl1O35188 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cx3cl1O35188 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cx3cl1O35188 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cx3cl1O35188 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cx3cl1O35188 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cx3cl1O35188 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cx3cl1O35188 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cx3cl1O35188 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cx3cl1O35188 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cx3cl1O35188 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cx3cl1O35188 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC13.77□□□□□ -0.21
Cx3cl1O35188 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cx3cl1O35188 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cx3cl1O35188 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cx3cl1O35188 AC126250.1-201ENSMUST00000228343 1768 ntBASIC13.76□□□□□ -0.21
Cx3cl1O35188 Gm38042-201ENSMUST00000191614 5208 ntBASIC13.76□□□□□ -0.21
Cx3cl1O35188 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cx3cl1O35188 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cx3cl1O35188 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cx3cl1O35188 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cx3cl1O35188 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cx3cl1O35188 Gm13233-201ENSMUST00000118760 1443 ntBASIC13.76□□□□□ -0.21
Cx3cl1O35188 Gm13244-201ENSMUST00000118855 1446 ntBASIC13.76□□□□□ -0.21
Cx3cl1O35188 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cx3cl1O35188 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC13.76□□□□□ -0.21
Cx3cl1O35188 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cx3cl1O35188 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cx3cl1O35188 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cx3cl1O35188 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cx3cl1O35188 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cx3cl1O35188 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC13.76□□□□□ -0.21
Cx3cl1O35188 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC13.76□□□□□ -0.21
Cx3cl1O35188 Gm5628-201ENSMUST00000222318 1049 ntBASIC13.76□□□□□ -0.21
Cx3cl1O35188 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cx3cl1O35188 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cx3cl1O35188 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cx3cl1O35188 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms