Protein–RNA interactions for Protein: O35185

Bhlhe40, Class E basic helix-loop-helix protein 40, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bhlhe40O35185 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Bhlhe40O35185 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Bhlhe40O35185 Gm8749-201ENSMUST00000117737 331 ntBASIC14.42□□□□□ -0.1
Bhlhe40O35185 Gm13453-201ENSMUST00000118708 357 ntBASIC14.42□□□□□ -0.1
Bhlhe40O35185 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC14.42□□□□□ -0.1
Bhlhe40O35185 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Bhlhe40O35185 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Bhlhe40O35185 Gm6944-201ENSMUST00000182449 1006 ntBASIC14.42□□□□□ -0.1
Bhlhe40O35185 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC14.42□□□□□ -0.1
Bhlhe40O35185 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Bhlhe40O35185 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Bhlhe40O35185 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Bhlhe40O35185 Gm5626-201ENSMUST00000222151 1058 ntBASIC14.42□□□□□ -0.1
Bhlhe40O35185 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Bhlhe40O35185 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Bhlhe40O35185 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Bhlhe40O35185 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Bhlhe40O35185 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Bhlhe40O35185 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Bhlhe40O35185 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Bhlhe40O35185 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Bhlhe40O35185 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Bhlhe40O35185 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Bhlhe40O35185 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Bhlhe40O35185 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Bhlhe40O35185 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Bhlhe40O35185 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Bhlhe40O35185 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Bhlhe40O35185 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Bhlhe40O35185 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Bhlhe40O35185 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Bhlhe40O35185 Asic1-205ENSMUST00000228185 1818 ntBASIC14.41□□□□□ -0.1
Bhlhe40O35185 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Bhlhe40O35185 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Bhlhe40O35185 Gm14780-201ENSMUST00000118387 2737 ntBASIC14.41□□□□□ -0.1
Bhlhe40O35185 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Bhlhe40O35185 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Bhlhe40O35185 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC14.41□□□□□ -0.1
Bhlhe40O35185 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Bhlhe40O35185 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC14.41□□□□□ -0.1
Bhlhe40O35185 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Bhlhe40O35185 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC14.41□□□□□ -0.1
Bhlhe40O35185 Gm27989-201ENSMUST00000184721 107 ntBASIC14.41□□□□□ -0.1
Bhlhe40O35185 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC14.41□□□□□ -0.1
Bhlhe40O35185 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Bhlhe40O35185 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Bhlhe40O35185 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Bhlhe40O35185 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Bhlhe40O35185 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Bhlhe40O35185 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Bhlhe40O35185 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Bhlhe40O35185 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Bhlhe40O35185 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Bhlhe40O35185 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Bhlhe40O35185 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Bhlhe40O35185 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Bhlhe40O35185 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Bhlhe40O35185 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Bhlhe40O35185 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Bhlhe40O35185 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Bhlhe40O35185 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Bhlhe40O35185 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Bhlhe40O35185 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Bhlhe40O35185 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Bhlhe40O35185 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Bhlhe40O35185 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC14.4□□□□□ -0.1
Bhlhe40O35185 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC14.4□□□□□ -0.1
Bhlhe40O35185 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Bhlhe40O35185 Gm25144-201ENSMUST00000179561 110 ntBASIC14.4□□□□□ -0.1
Bhlhe40O35185 Gm25352-201ENSMUST00000179815 110 ntBASIC14.4□□□□□ -0.1
Bhlhe40O35185 Gm27533-201ENSMUST00000183800 152 ntBASIC14.4□□□□□ -0.1
Bhlhe40O35185 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Bhlhe40O35185 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC14.4□□□□□ -0.1
Bhlhe40O35185 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Bhlhe40O35185 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Bhlhe40O35185 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Bhlhe40O35185 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Bhlhe40O35185 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Bhlhe40O35185 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Bhlhe40O35185 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Bhlhe40O35185 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Bhlhe40O35185 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Bhlhe40O35185 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC14.4□□□□□ -0.1
Bhlhe40O35185 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Bhlhe40O35185 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.11
Bhlhe40O35185 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Bhlhe40O35185 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Bhlhe40O35185 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Bhlhe40O35185 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Bhlhe40O35185 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Bhlhe40O35185 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Bhlhe40O35185 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Bhlhe40O35185 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Bhlhe40O35185 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Bhlhe40O35185 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Bhlhe40O35185 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Bhlhe40O35185 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Bhlhe40O35185 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC14.39□□□□□ -0.11
Bhlhe40O35185 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC14.39□□□□□ -0.11
Bhlhe40O35185 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 717.3 ms