Protein–RNA interactions for Protein: O09106

Hdac1, Histone deacetylase 1, mousemouse

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac1O09106 Gm14042-201ENSMUST00000120139 833 ntBASIC17.46■□□□□ 0.39
Hdac1O09106 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC17.46■□□□□ 0.39
Hdac1O09106 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Hdac1O09106 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC17.46■□□□□ 0.39
Hdac1O09106 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Hdac1O09106 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC17.46■□□□□ 0.39
Hdac1O09106 Gm43347-201ENSMUST00000200226 580 ntBASIC17.46■□□□□ 0.39
Hdac1O09106 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC17.46■□□□□ 0.39
Hdac1O09106 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Hdac1O09106 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hdac1O09106 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Hdac1O09106 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hdac1O09106 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hdac1O09106 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hdac1O09106 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hdac1O09106 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hdac1O09106 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC17.46■□□□□ 0.39
Hdac1O09106 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Hdac1O09106 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC17.46■□□□□ 0.39
Hdac1O09106 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Hdac1O09106 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.38
Hdac1O09106 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Hdac1O09106 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Hdac1O09106 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Hdac1O09106 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Hdac1O09106 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Hdac1O09106 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hdac1O09106 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hdac1O09106 Gm45605-201ENSMUST00000210265 4269 ntBASIC17.45■□□□□ 0.38
Hdac1O09106 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hdac1O09106 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hdac1O09106 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hdac1O09106 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC17.45■□□□□ 0.38
Hdac1O09106 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Hdac1O09106 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC17.45■□□□□ 0.38
Hdac1O09106 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC17.45■□□□□ 0.38
Hdac1O09106 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hdac1O09106 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hdac1O09106 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hdac1O09106 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hdac1O09106 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Hdac1O09106 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hdac1O09106 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hdac1O09106 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hdac1O09106 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hdac1O09106 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hdac1O09106 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hdac1O09106 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hdac1O09106 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hdac1O09106 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hdac1O09106 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hdac1O09106 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hdac1O09106 CT030684.3-201ENSMUST00000227308 2445 ntBASIC17.45■□□□□ 0.38
Hdac1O09106 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hdac1O09106 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hdac1O09106 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hdac1O09106 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hdac1O09106 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
Hdac1O09106 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hdac1O09106 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC17.44■□□□□ 0.38
Hdac1O09106 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hdac1O09106 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hdac1O09106 Gm37019-201ENSMUST00000192133 2134 ntBASIC17.44■□□□□ 0.38
Hdac1O09106 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Hdac1O09106 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hdac1O09106 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Hdac1O09106 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC17.44■□□□□ 0.38
Hdac1O09106 Gm6376-201ENSMUST00000209407 580 ntBASIC17.44■□□□□ 0.38
Hdac1O09106 Rps4l-201ENSMUST00000071745 943 ntBASIC17.44■□□□□ 0.38
Hdac1O09106 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hdac1O09106 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Hdac1O09106 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hdac1O09106 Ptprs-211ENSMUST00000223859 5588 ntBASIC17.44■□□□□ 0.38
Hdac1O09106 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hdac1O09106 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC17.44■□□□□ 0.38
Hdac1O09106 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hdac1O09106 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hdac1O09106 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hdac1O09106 Gm37411-201ENSMUST00000194180 2282 ntBASIC17.44■□□□□ 0.38
Hdac1O09106 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hdac1O09106 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Hdac1O09106 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hdac1O09106 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Hdac1O09106 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hdac1O09106 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hdac1O09106 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC17.43■□□□□ 0.38
Hdac1O09106 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hdac1O09106 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Hdac1O09106 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hdac1O09106 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hdac1O09106 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hdac1O09106 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC17.43■□□□□ 0.38
Hdac1O09106 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hdac1O09106 Gm15173-201ENSMUST00000122049 433 ntBASIC17.43■□□□□ 0.38
Hdac1O09106 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC17.43■□□□□ 0.38
Hdac1O09106 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Hdac1O09106 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Hdac1O09106 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hdac1O09106 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Hdac1O09106 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 83.4 ms