Protein–RNA interactions for Protein: O08795

Prkcsh, Glucosidase 2 subunit beta, mousemouse

Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkcshO08795 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC17.11■□□□□ 0.33
PrkcshO08795 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PrkcshO08795 Esr2-202ENSMUST00000101291 3362 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PrkcshO08795 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PrkcshO08795 Gm36987-201ENSMUST00000194704 2979 ntBASIC17.1■□□□□ 0.33
PrkcshO08795 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PrkcshO08795 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PrkcshO08795 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PrkcshO08795 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
PrkcshO08795 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PrkcshO08795 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC17.1■□□□□ 0.33
PrkcshO08795 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PrkcshO08795 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
PrkcshO08795 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PrkcshO08795 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PrkcshO08795 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PrkcshO08795 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
PrkcshO08795 Gm13534-201ENSMUST00000121169 513 ntBASIC17.1■□□□□ 0.33
PrkcshO08795 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC17.1■□□□□ 0.33
PrkcshO08795 Gm42555-201ENSMUST00000199304 1039 ntBASIC17.1■□□□□ 0.33
PrkcshO08795 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
PrkcshO08795 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PrkcshO08795 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PrkcshO08795 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PrkcshO08795 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PrkcshO08795 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PrkcshO08795 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PrkcshO08795 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PrkcshO08795 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
PrkcshO08795 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PrkcshO08795 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PrkcshO08795 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PrkcshO08795 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PrkcshO08795 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PrkcshO08795 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
PrkcshO08795 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PrkcshO08795 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PrkcshO08795 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PrkcshO08795 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.09■□□□□ 0.33
PrkcshO08795 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC17.09■□□□□ 0.33
PrkcshO08795 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PrkcshO08795 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PrkcshO08795 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PrkcshO08795 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC17.09■□□□□ 0.33
PrkcshO08795 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PrkcshO08795 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PrkcshO08795 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
PrkcshO08795 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PrkcshO08795 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC17.09■□□□□ 0.33
PrkcshO08795 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PrkcshO08795 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PrkcshO08795 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PrkcshO08795 AC123738.2-201ENSMUST00000223791 1899 ntBASIC17.09■□□□□ 0.33
PrkcshO08795 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PrkcshO08795 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC17.09■□□□□ 0.33
PrkcshO08795 BC043934-202ENSMUST00000185694 2356 ntBASIC17.09■□□□□ 0.33
PrkcshO08795 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PrkcshO08795 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PrkcshO08795 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
PrkcshO08795 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
PrkcshO08795 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
PrkcshO08795 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PrkcshO08795 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
PrkcshO08795 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
PrkcshO08795 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PrkcshO08795 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
PrkcshO08795 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
PrkcshO08795 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PrkcshO08795 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PrkcshO08795 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC17.08■□□□□ 0.32
PrkcshO08795 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
PrkcshO08795 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PrkcshO08795 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
PrkcshO08795 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
PrkcshO08795 Gm10653-202ENSMUST00000139570 835 ntBASIC17.08■□□□□ 0.32
PrkcshO08795 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC17.08■□□□□ 0.32
PrkcshO08795 Gm6420-201ENSMUST00000193885 723 ntBASIC17.08■□□□□ 0.32
PrkcshO08795 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC17.08■□□□□ 0.32
PrkcshO08795 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC17.08■□□□□ 0.32
PrkcshO08795 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC17.08■□□□□ 0.32
PrkcshO08795 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC17.08■□□□□ 0.32
PrkcshO08795 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
PrkcshO08795 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PrkcshO08795 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PrkcshO08795 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PrkcshO08795 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PrkcshO08795 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
PrkcshO08795 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
PrkcshO08795 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PrkcshO08795 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PrkcshO08795 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PrkcshO08795 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC17.07■□□□□ 0.32
PrkcshO08795 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PrkcshO08795 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PrkcshO08795 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PrkcshO08795 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
PrkcshO08795 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
PrkcshO08795 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC17.07■□□□□ 0.32
PrkcshO08795 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC17.07■□□□□ 0.32
PrkcshO08795 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms