Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdh1F7BJK1 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdh1F7BJK1 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdh1F7BJK1 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13.21□□□□□ -0.29
Pcdh1F7BJK1 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdh1F7BJK1 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
Pcdh1F7BJK1 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdh1F7BJK1 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdh1F7BJK1 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC13.21□□□□□ -0.29
Pcdh1F7BJK1 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdh1F7BJK1 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdh1F7BJK1 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdh1F7BJK1 Gm4535-201ENSMUST00000182274 558 ntBASIC13.21□□□□□ -0.29
Pcdh1F7BJK1 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC13.21□□□□□ -0.29
Pcdh1F7BJK1 Gm5253-201ENSMUST00000187104 1025 ntBASIC13.21□□□□□ -0.29
Pcdh1F7BJK1 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdh1F7BJK1 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdh1F7BJK1 Gm10355-201ENSMUST00000097146 517 ntBASIC13.21□□□□□ -0.29
Pcdh1F7BJK1 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdh1F7BJK1 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdh1F7BJK1 AC126250.1-201ENSMUST00000228343 1768 ntBASIC13.21□□□□□ -0.29
Pcdh1F7BJK1 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC13.21□□□□□ -0.29
Pcdh1F7BJK1 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdh1F7BJK1 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdh1F7BJK1 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Pcdh1F7BJK1 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Pcdh1F7BJK1 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Pcdh1F7BJK1 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Pcdh1F7BJK1 AC130669.1-201ENSMUST00000228537 1672 ntBASIC13.21□□□□□ -0.3
Pcdh1F7BJK1 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC13.21□□□□□ -0.3
Pcdh1F7BJK1 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Pcdh1F7BJK1 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Pcdh1F7BJK1 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdh1F7BJK1 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdh1F7BJK1 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdh1F7BJK1 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdh1F7BJK1 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdh1F7BJK1 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
Pcdh1F7BJK1 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdh1F7BJK1 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdh1F7BJK1 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC13.2□□□□□ -0.3
Pcdh1F7BJK1 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdh1F7BJK1 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Pcdh1F7BJK1 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC13.2□□□□□ -0.3
Pcdh1F7BJK1 Gm28033-201ENSMUST00000184224 96 ntBASIC13.2□□□□□ -0.3
Pcdh1F7BJK1 Gm9682-201ENSMUST00000197505 556 ntBASIC13.2□□□□□ -0.3
Pcdh1F7BJK1 AC151836.1-202ENSMUST00000226259 753 ntBASIC13.2□□□□□ -0.3
Pcdh1F7BJK1 AC130671.1-201ENSMUST00000227384 1237 ntBASIC13.2□□□□□ -0.3
Pcdh1F7BJK1 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdh1F7BJK1 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdh1F7BJK1 Spr-ps1-201ENSMUST00000089584 605 ntBASIC13.2□□□□□ -0.3
Pcdh1F7BJK1 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC13.2□□□□□ -0.3
Pcdh1F7BJK1 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
Pcdh1F7BJK1 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC13.2□□□□□ -0.3
Pcdh1F7BJK1 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdh1F7BJK1 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdh1F7BJK1 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdh1F7BJK1 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Pcdh1F7BJK1 Gm26513-201ENSMUST00000181802 2489 ntBASIC13.2□□□□□ -0.3
Pcdh1F7BJK1 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdh1F7BJK1 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdh1F7BJK1 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Pcdh1F7BJK1 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
Pcdh1F7BJK1 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdh1F7BJK1 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdh1F7BJK1 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Pcdh1F7BJK1 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC13.2□□□□□ -0.3
Pcdh1F7BJK1 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Pcdh1F7BJK1 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdh1F7BJK1 Gm38391-201ENSMUST00000191720 4069 ntBASIC13.19□□□□□ -0.3
Pcdh1F7BJK1 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh1F7BJK1 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh1F7BJK1 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC13.19□□□□□ -0.3
Pcdh1F7BJK1 Gm19863-201ENSMUST00000192480 2218 ntBASIC13.19□□□□□ -0.3
Pcdh1F7BJK1 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh1F7BJK1 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh1F7BJK1 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC13.19□□□□□ -0.3
Pcdh1F7BJK1 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC13.19□□□□□ -0.3
Pcdh1F7BJK1 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC13.19□□□□□ -0.3
Pcdh1F7BJK1 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC13.19□□□□□ -0.3
Pcdh1F7BJK1 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh1F7BJK1 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC13.19□□□□□ -0.3
Pcdh1F7BJK1 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Pcdh1F7BJK1 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Pcdh1F7BJK1 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Pcdh1F7BJK1 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Pcdh1F7BJK1 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh1F7BJK1 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh1F7BJK1 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh1F7BJK1 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh1F7BJK1 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh1F7BJK1 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh1F7BJK1 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh1F7BJK1 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh1F7BJK1 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh1F7BJK1 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh1F7BJK1 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh1F7BJK1 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh1F7BJK1 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh1F7BJK1 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 61.1 ms