Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Gm45212-201ENSMUST00000205831 3403 ntBASIC14.45□□□□□ -0.1
Srp54bE9PXC0 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC14.45□□□□□ -0.1
Srp54bE9PXC0 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Srp54bE9PXC0 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Srp54bE9PXC0 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Srp54bE9PXC0 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Srp54bE9PXC0 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Srp54bE9PXC0 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Srp54bE9PXC0 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Srp54bE9PXC0 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Srp54bE9PXC0 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Srp54bE9PXC0 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Srp54bE9PXC0 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Srp54bE9PXC0 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Srp54bE9PXC0 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Srp54bE9PXC0 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Srp54bE9PXC0 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Srp54bE9PXC0 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
Srp54bE9PXC0 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Srp54bE9PXC0 Gm5566-201ENSMUST00000116118 459 ntBASIC14.44□□□□□ -0.1
Srp54bE9PXC0 Trav13-3-201ENSMUST00000117226 336 ntBASIC14.44□□□□□ -0.1
Srp54bE9PXC0 Gm9719-201ENSMUST00000162765 543 ntBASIC14.44□□□□□ -0.1
Srp54bE9PXC0 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC14.44□□□□□ -0.1
Srp54bE9PXC0 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Srp54bE9PXC0 Gm27533-201ENSMUST00000183800 152 ntBASIC14.44□□□□□ -0.1
Srp54bE9PXC0 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC14.44□□□□□ -0.1
Srp54bE9PXC0 Wdyhv1-203ENSMUST00000226889 394 ntBASIC14.44□□□□□ -0.1
Srp54bE9PXC0 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Srp54bE9PXC0 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Srp54bE9PXC0 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Srp54bE9PXC0 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Srp54bE9PXC0 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Srp54bE9PXC0 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Srp54bE9PXC0 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Srp54bE9PXC0 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Srp54bE9PXC0 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Srp54bE9PXC0 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Srp54bE9PXC0 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Srp54bE9PXC0 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Srp54bE9PXC0 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Srp54bE9PXC0 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Srp54bE9PXC0 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Srp54bE9PXC0 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Srp54bE9PXC0 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Srp54bE9PXC0 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC14.43□□□□□ -0.1
Srp54bE9PXC0 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Srp54bE9PXC0 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Srp54bE9PXC0 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Srp54bE9PXC0 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Srp54bE9PXC0 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Srp54bE9PXC0 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Srp54bE9PXC0 Gm43352-201ENSMUST00000196419 3065 ntBASIC14.43□□□□□ -0.1
Srp54bE9PXC0 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC14.43□□□□□ -0.1
Srp54bE9PXC0 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Srp54bE9PXC0 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Srp54bE9PXC0 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Srp54bE9PXC0 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Srp54bE9PXC0 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Srp54bE9PXC0 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Srp54bE9PXC0 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Srp54bE9PXC0 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC14.43□□□□□ -0.1
Srp54bE9PXC0 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Srp54bE9PXC0 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Srp54bE9PXC0 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Srp54bE9PXC0 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Srp54bE9PXC0 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Srp54bE9PXC0 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Srp54bE9PXC0 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.42□□□□□ -0.1
Srp54bE9PXC0 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Srp54bE9PXC0 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Srp54bE9PXC0 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Srp54bE9PXC0 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Srp54bE9PXC0 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Srp54bE9PXC0 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Srp54bE9PXC0 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Srp54bE9PXC0 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Srp54bE9PXC0 Gm24543-201ENSMUST00000103867 82 ntBASIC14.42□□□□□ -0.1
Srp54bE9PXC0 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC14.42□□□□□ -0.1
Srp54bE9PXC0 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
Srp54bE9PXC0 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Srp54bE9PXC0 Gm5866-201ENSMUST00000177881 973 ntBASIC14.42□□□□□ -0.1
Srp54bE9PXC0 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Srp54bE9PXC0 Gm44344-201ENSMUST00000200287 129 ntBASIC14.42□□□□□ -0.1
Srp54bE9PXC0 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Srp54bE9PXC0 Gm9063-201ENSMUST00000223299 582 ntBASIC14.42□□□□□ -0.1
Srp54bE9PXC0 AC090659.2-201ENSMUST00000225378 1186 ntBASIC14.42□□□□□ -0.1
Srp54bE9PXC0 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Srp54bE9PXC0 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Srp54bE9PXC0 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Srp54bE9PXC0 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Srp54bE9PXC0 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Srp54bE9PXC0 Gm16011-201ENSMUST00000121567 2662 ntBASIC14.42□□□□□ -0.1
Srp54bE9PXC0 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Srp54bE9PXC0 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC14.42□□□□□ -0.1
Srp54bE9PXC0 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Srp54bE9PXC0 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Srp54bE9PXC0 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
Srp54bE9PXC0 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Srp54bE9PXC0 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Srp54bE9PXC0 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms