Protein–RNA interactions for Protein: D3Z4R4

Nkx6-2, NK6 homeobox 2, mousemouse

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-2D3Z4R4 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx6-2D3Z4R4 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx6-2D3Z4R4 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx6-2D3Z4R4 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx6-2D3Z4R4 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx6-2D3Z4R4 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx6-2D3Z4R4 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx6-2D3Z4R4 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Nkx6-2D3Z4R4 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx6-2D3Z4R4 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx6-2D3Z4R4 Gm7114-201ENSMUST00000190159 1789 ntBASIC11.92□□□□□ -0.5
Nkx6-2D3Z4R4 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx6-2D3Z4R4 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx6-2D3Z4R4 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx6-2D3Z4R4 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx6-2D3Z4R4 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx6-2D3Z4R4 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx6-2D3Z4R4 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
Nkx6-2D3Z4R4 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx6-2D3Z4R4 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx6-2D3Z4R4 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx6-2D3Z4R4 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC11.92□□□□□ -0.5
Nkx6-2D3Z4R4 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC11.92□□□□□ -0.5
Nkx6-2D3Z4R4 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx6-2D3Z4R4 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
Nkx6-2D3Z4R4 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx6-2D3Z4R4 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
Nkx6-2D3Z4R4 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC11.92□□□□□ -0.5
Nkx6-2D3Z4R4 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx6-2D3Z4R4 Gm15378-201ENSMUST00000121894 207 ntBASIC11.92□□□□□ -0.5
Nkx6-2D3Z4R4 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx6-2D3Z4R4 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx6-2D3Z4R4 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx6-2D3Z4R4 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx6-2D3Z4R4 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC11.92□□□□□ -0.5
Nkx6-2D3Z4R4 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC11.92□□□□□ -0.5
Nkx6-2D3Z4R4 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx6-2D3Z4R4 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx6-2D3Z4R4 Zfp264-201ENSMUST00000208656 1563 ntBASIC11.92□□□□□ -0.5
Nkx6-2D3Z4R4 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC11.92□□□□□ -0.5
Nkx6-2D3Z4R4 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx6-2D3Z4R4 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Nkx6-2D3Z4R4 Gm45743-201ENSMUST00000212701 2795 ntBASIC11.91□□□□□ -0.5
Nkx6-2D3Z4R4 Gm27196-201ENSMUST00000184787 2582 ntBASIC11.91□□□□□ -0.5
Nkx6-2D3Z4R4 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx6-2D3Z4R4 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx6-2D3Z4R4 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx6-2D3Z4R4 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx6-2D3Z4R4 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx6-2D3Z4R4 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC11.91□□□□□ -0.5
Nkx6-2D3Z4R4 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC11.91□□□□□ -0.5
Nkx6-2D3Z4R4 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx6-2D3Z4R4 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Nkx6-2D3Z4R4 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx6-2D3Z4R4 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx6-2D3Z4R4 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx6-2D3Z4R4 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx6-2D3Z4R4 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx6-2D3Z4R4 Gm13186-201ENSMUST00000118031 316 ntBASIC11.91□□□□□ -0.5
Nkx6-2D3Z4R4 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx6-2D3Z4R4 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx6-2D3Z4R4 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx6-2D3Z4R4 Gm7367-201ENSMUST00000057611 492 ntBASIC11.91□□□□□ -0.5
Nkx6-2D3Z4R4 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx6-2D3Z4R4 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC11.91□□□□□ -0.5
Nkx6-2D3Z4R4 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC11.91□□□□□ -0.5
Nkx6-2D3Z4R4 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx6-2D3Z4R4 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx6-2D3Z4R4 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Nkx6-2D3Z4R4 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Nkx6-2D3Z4R4 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx6-2D3Z4R4 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx6-2D3Z4R4 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx6-2D3Z4R4 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Nkx6-2D3Z4R4 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx6-2D3Z4R4 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Nkx6-2D3Z4R4 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Nkx6-2D3Z4R4 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Nkx6-2D3Z4R4 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC11.9□□□□□ -0.5
Nkx6-2D3Z4R4 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx6-2D3Z4R4 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx6-2D3Z4R4 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx6-2D3Z4R4 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx6-2D3Z4R4 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx6-2D3Z4R4 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC11.9□□□□□ -0.5
Nkx6-2D3Z4R4 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx6-2D3Z4R4 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx6-2D3Z4R4 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx6-2D3Z4R4 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC11.9□□□□□ -0.5
Nkx6-2D3Z4R4 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx6-2D3Z4R4 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx6-2D3Z4R4 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC11.9□□□□□ -0.5
Nkx6-2D3Z4R4 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx6-2D3Z4R4 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx6-2D3Z4R4 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx6-2D3Z4R4 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx6-2D3Z4R4 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx6-2D3Z4R4 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx6-2D3Z4R4 Gm10728-201ENSMUST00000194292 1829 ntBASIC11.9□□□□□ -0.5
Nkx6-2D3Z4R4 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms