Protein–RNA interactions for Protein: D3Z235

Gm3543, Predicted gene 3543, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3543D3Z235 Gm12612-201ENSMUST00000140182 1986 ntBASIC13.28□□□□□ -0.28
Gm3543D3Z235 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC13.28□□□□□ -0.28
Gm3543D3Z235 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Gm3543D3Z235 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gm3543D3Z235 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Gm3543D3Z235 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gm3543D3Z235 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Gm3543D3Z235 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Gm3543D3Z235 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gm3543D3Z235 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gm3543D3Z235 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Gm3543D3Z235 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
Gm3543D3Z235 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gm3543D3Z235 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Gm3543D3Z235 AC130669.1-201ENSMUST00000228537 1672 ntBASIC13.28□□□□□ -0.28
Gm3543D3Z235 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Gm3543D3Z235 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Gm3543D3Z235 Nrn1-204ENSMUST00000224323 1779 ntBASIC13.27□□□□□ -0.28
Gm3543D3Z235 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Gm3543D3Z235 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC13.27□□□□□ -0.28
Gm3543D3Z235 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Gm3543D3Z235 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Gm3543D3Z235 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
Gm3543D3Z235 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Gm3543D3Z235 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
Gm3543D3Z235 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Gm3543D3Z235 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC13.27□□□□□ -0.29
Gm3543D3Z235 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Gm3543D3Z235 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Gm3543D3Z235 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC13.27□□□□□ -0.29
Gm3543D3Z235 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Gm3543D3Z235 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Gm3543D3Z235 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Gm3543D3Z235 Gm45612-201ENSMUST00000211320 160 ntBASIC13.27□□□□□ -0.29
Gm3543D3Z235 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC13.27□□□□□ -0.29
Gm3543D3Z235 Chchd1-203ENSMUST00000224633 557 ntBASIC13.27□□□□□ -0.29
Gm3543D3Z235 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Gm3543D3Z235 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC13.27□□□□□ -0.29
Gm3543D3Z235 Gm10154-201ENSMUST00000084445 354 ntBASIC13.27□□□□□ -0.29
Gm3543D3Z235 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC13.27□□□□□ -0.29
Gm3543D3Z235 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Gm3543D3Z235 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC13.27□□□□□ -0.29
Gm3543D3Z235 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Gm3543D3Z235 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Gm3543D3Z235 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Gm3543D3Z235 Gm8242-201ENSMUST00000193029 1420 ntBASIC13.27□□□□□ -0.29
Gm3543D3Z235 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Gm3543D3Z235 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Gm3543D3Z235 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Gm3543D3Z235 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
Gm3543D3Z235 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Gm3543D3Z235 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC13.27□□□□□ -0.29
Gm3543D3Z235 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Gm3543D3Z235 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Gm3543D3Z235 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Gm3543D3Z235 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Gm3543D3Z235 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Gm3543D3Z235 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Gm3543D3Z235 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC13.26□□□□□ -0.29
Gm3543D3Z235 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm3543D3Z235 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm3543D3Z235 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Gm3543D3Z235 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC13.26□□□□□ -0.29
Gm3543D3Z235 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm3543D3Z235 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm3543D3Z235 Gm6226-201ENSMUST00000117765 1146 ntBASIC13.26□□□□□ -0.29
Gm3543D3Z235 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC13.26□□□□□ -0.29
Gm3543D3Z235 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm3543D3Z235 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC13.26□□□□□ -0.29
Gm3543D3Z235 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC13.26□□□□□ -0.29
Gm3543D3Z235 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC13.26□□□□□ -0.29
Gm3543D3Z235 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC13.26□□□□□ -0.29
Gm3543D3Z235 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC13.26□□□□□ -0.29
Gm3543D3Z235 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm3543D3Z235 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm3543D3Z235 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC13.26□□□□□ -0.29
Gm3543D3Z235 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC13.26□□□□□ -0.29
Gm3543D3Z235 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm3543D3Z235 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm3543D3Z235 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm3543D3Z235 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm3543D3Z235 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm3543D3Z235 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm3543D3Z235 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm3543D3Z235 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm3543D3Z235 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm3543D3Z235 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm3543D3Z235 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm3543D3Z235 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gm3543D3Z235 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gm3543D3Z235 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Gm3543D3Z235 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gm3543D3Z235 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gm3543D3Z235 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gm3543D3Z235 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Gm3543D3Z235 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gm3543D3Z235 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Gm3543D3Z235 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
Gm3543D3Z235 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC13.25□□□□□ -0.29
Gm3543D3Z235 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 66.5 ms