Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chd3B1AR17 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC14.35□□□□□ -0.11
Chd3B1AR17 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chd3B1AR17 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chd3B1AR17 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chd3B1AR17 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Chd3B1AR17 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Chd3B1AR17 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chd3B1AR17 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Chd3B1AR17 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chd3B1AR17 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Chd3B1AR17 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chd3B1AR17 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Chd3B1AR17 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chd3B1AR17 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Chd3B1AR17 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chd3B1AR17 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Chd3B1AR17 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chd3B1AR17 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Chd3B1AR17 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chd3B1AR17 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chd3B1AR17 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chd3B1AR17 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC14.35□□□□□ -0.11
Chd3B1AR17 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC14.35□□□□□ -0.11
Chd3B1AR17 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chd3B1AR17 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Chd3B1AR17 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chd3B1AR17 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chd3B1AR17 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Chd3B1AR17 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
Chd3B1AR17 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Chd3B1AR17 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chd3B1AR17 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC14.34□□□□□ -0.11
Chd3B1AR17 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chd3B1AR17 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chd3B1AR17 Gm25144-201ENSMUST00000179561 110 ntBASIC14.34□□□□□ -0.11
Chd3B1AR17 Gm25352-201ENSMUST00000179815 110 ntBASIC14.34□□□□□ -0.11
Chd3B1AR17 Gm30437-201ENSMUST00000206086 1201 ntBASIC14.34□□□□□ -0.11
Chd3B1AR17 AC125206.2-201ENSMUST00000217454 574 ntBASIC14.34□□□□□ -0.11
Chd3B1AR17 Hist1h2al-201ENSMUST00000091708 339 ntBASIC14.34□□□□□ -0.11
Chd3B1AR17 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chd3B1AR17 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC14.34□□□□□ -0.11
Chd3B1AR17 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chd3B1AR17 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chd3B1AR17 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chd3B1AR17 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chd3B1AR17 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Chd3B1AR17 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chd3B1AR17 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chd3B1AR17 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chd3B1AR17 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Chd3B1AR17 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Chd3B1AR17 Gm10275-202ENSMUST00000168697 495 ntBASIC14.34□□□□□ -0.11
Chd3B1AR17 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Chd3B1AR17 Gm27631-201ENSMUST00000184163 466 ntBASIC14.34□□□□□ -0.11
Chd3B1AR17 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Chd3B1AR17 Gm10275-201ENSMUST00000092620 635 ntBASIC14.34□□□□□ -0.11
Chd3B1AR17 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Chd3B1AR17 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Chd3B1AR17 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Chd3B1AR17 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Chd3B1AR17 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Chd3B1AR17 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chd3B1AR17 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chd3B1AR17 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Chd3B1AR17 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC14.33□□□□□ -0.12
Chd3B1AR17 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chd3B1AR17 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chd3B1AR17 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chd3B1AR17 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chd3B1AR17 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chd3B1AR17 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chd3B1AR17 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Chd3B1AR17 Gm5866-201ENSMUST00000177881 973 ntBASIC14.33□□□□□ -0.12
Chd3B1AR17 Mir7684-201ENSMUST00000183858 60 ntBASIC14.33□□□□□ -0.12
Chd3B1AR17 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Chd3B1AR17 AC090659.2-201ENSMUST00000225378 1186 ntBASIC14.33□□□□□ -0.12
Chd3B1AR17 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chd3B1AR17 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Chd3B1AR17 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Chd3B1AR17 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chd3B1AR17 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chd3B1AR17 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chd3B1AR17 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chd3B1AR17 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chd3B1AR17 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chd3B1AR17 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Chd3B1AR17 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Chd3B1AR17 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chd3B1AR17 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chd3B1AR17 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chd3B1AR17 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Chd3B1AR17 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chd3B1AR17 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chd3B1AR17 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chd3B1AR17 Trav13-3-201ENSMUST00000117226 336 ntBASIC14.32□□□□□ -0.12
Chd3B1AR17 Gm13453-201ENSMUST00000118708 357 ntBASIC14.32□□□□□ -0.12
Chd3B1AR17 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Chd3B1AR17 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC14.32□□□□□ -0.12
Chd3B1AR17 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms