Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC12.26□□□□□ -0.45
Trav12-1A0N8R1 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav12-1A0N8R1 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav12-1A0N8R1 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Trav12-1A0N8R1 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Trav12-1A0N8R1 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav12-1A0N8R1 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav12-1A0N8R1 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC12.26□□□□□ -0.45
Trav12-1A0N8R1 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav12-1A0N8R1 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav12-1A0N8R1 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav12-1A0N8R1 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav12-1A0N8R1 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav12-1A0N8R1 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav12-1A0N8R1 AC025913.2-201ENSMUST00000220136 1766 ntBASIC12.25□□□□□ -0.45
Trav12-1A0N8R1 AC126250.1-201ENSMUST00000228343 1768 ntBASIC12.25□□□□□ -0.45
Trav12-1A0N8R1 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav12-1A0N8R1 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav12-1A0N8R1 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav12-1A0N8R1 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC12.25□□□□□ -0.45
Trav12-1A0N8R1 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav12-1A0N8R1 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav12-1A0N8R1 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav12-1A0N8R1 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav12-1A0N8R1 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav12-1A0N8R1 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav12-1A0N8R1 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav12-1A0N8R1 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav12-1A0N8R1 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav12-1A0N8R1 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav12-1A0N8R1 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Trav12-1A0N8R1 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav12-1A0N8R1 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav12-1A0N8R1 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC12.25□□□□□ -0.45
Trav12-1A0N8R1 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav12-1A0N8R1 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC12.25□□□□□ -0.45
Trav12-1A0N8R1 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC12.25□□□□□ -0.45
Trav12-1A0N8R1 Ank2-226ENSMUST00000189368 339 ntBASIC12.25□□□□□ -0.45
Trav12-1A0N8R1 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav12-1A0N8R1 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav12-1A0N8R1 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav12-1A0N8R1 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Trav12-1A0N8R1 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav12-1A0N8R1 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav12-1A0N8R1 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav12-1A0N8R1 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav12-1A0N8R1 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Trav12-1A0N8R1 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav12-1A0N8R1 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav12-1A0N8R1 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav12-1A0N8R1 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Trav12-1A0N8R1 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Trav12-1A0N8R1 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav12-1A0N8R1 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav12-1A0N8R1 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav12-1A0N8R1 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav12-1A0N8R1 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav12-1A0N8R1 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav12-1A0N8R1 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav12-1A0N8R1 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav12-1A0N8R1 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav12-1A0N8R1 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav12-1A0N8R1 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Trav12-1A0N8R1 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav12-1A0N8R1 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC12.24□□□□□ -0.45
Trav12-1A0N8R1 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav12-1A0N8R1 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Trav12-1A0N8R1 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC12.24□□□□□ -0.45
Trav12-1A0N8R1 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav12-1A0N8R1 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav12-1A0N8R1 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav12-1A0N8R1 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Trav12-1A0N8R1 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC12.24□□□□□ -0.45
Trav12-1A0N8R1 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav12-1A0N8R1 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav12-1A0N8R1 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav12-1A0N8R1 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav12-1A0N8R1 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC12.24□□□□□ -0.45
Trav12-1A0N8R1 Gm28033-201ENSMUST00000184224 96 ntBASIC12.24□□□□□ -0.45
Trav12-1A0N8R1 Gm6550-201ENSMUST00000187574 993 ntBASIC12.24□□□□□ -0.45
Trav12-1A0N8R1 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC12.24□□□□□ -0.45
Trav12-1A0N8R1 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav12-1A0N8R1 Gm45167-201ENSMUST00000208007 322 ntBASIC12.24□□□□□ -0.45
Trav12-1A0N8R1 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
Trav12-1A0N8R1 Gm5366-201ENSMUST00000215494 1338 ntBASIC12.24□□□□□ -0.45
Trav12-1A0N8R1 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC12.24□□□□□ -0.45
Trav12-1A0N8R1 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav12-1A0N8R1 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav12-1A0N8R1 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav12-1A0N8R1 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav12-1A0N8R1 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC12.24□□□□□ -0.45
Trav12-1A0N8R1 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav12-1A0N8R1 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav12-1A0N8R1 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Trav12-1A0N8R1 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav12-1A0N8R1 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Trav12-1A0N8R1 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav12-1A0N8R1 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Trav12-1A0N8R1 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav12-1A0N8R1 Rps4l-201ENSMUST00000071745 943 ntBASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms