Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Gm14859-201ENSMUST00000117752 357 ntBASIC10.13□□□□□ -0.79
Trav13d-4A0A0G2JFX3 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC10.13□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav13d-4A0A0G2JFX3 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC10.13□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC10.13□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC10.13□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC10.13□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC10.13□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav13d-4A0A0G2JFX3 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
Trav13d-4A0A0G2JFX3 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC10.13□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC10.13□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trav13d-4A0A0G2JFX3 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC10.12□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav13d-4A0A0G2JFX3 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav13d-4A0A0G2JFX3 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC10.12□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Gm15372-201ENSMUST00000120729 834 ntBASIC10.12□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC10.12□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC10.12□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Gm21009-201ENSMUST00000197169 1669 ntBASIC10.12□□□□□ -0.79
Trav13d-4A0A0G2JFX3 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav13d-4A0A0G2JFX3 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC10.11□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC10.11□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC10.11□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC10.11□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC10.11□□□□□ -0.79
Trav13d-4A0A0G2JFX3 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC10.11□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Gm27646-201ENSMUST00000183989 110 ntBASIC10.11□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms