Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav6d-7A0A075B6B0 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav6d-7A0A075B6B0 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Trav6d-7A0A075B6B0 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Trav6d-7A0A075B6B0 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC11.37□□□□□ -0.59
Trav6d-7A0A075B6B0 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav6d-7A0A075B6B0 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav6d-7A0A075B6B0 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav6d-7A0A075B6B0 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Trav6d-7A0A075B6B0 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Trav6d-7A0A075B6B0 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav6d-7A0A075B6B0 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav6d-7A0A075B6B0 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav6d-7A0A075B6B0 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav6d-7A0A075B6B0 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav6d-7A0A075B6B0 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Trav6d-7A0A075B6B0 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC11.36□□□□□ -0.59
Trav6d-7A0A075B6B0 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav6d-7A0A075B6B0 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav6d-7A0A075B6B0 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Trav6d-7A0A075B6B0 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav6d-7A0A075B6B0 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC11.36□□□□□ -0.59
Trav6d-7A0A075B6B0 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC11.36□□□□□ -0.59
Trav6d-7A0A075B6B0 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav6d-7A0A075B6B0 Gm27646-201ENSMUST00000183989 110 ntBASIC11.36□□□□□ -0.59
Trav6d-7A0A075B6B0 Gm5264-201ENSMUST00000190584 848 ntBASIC11.36□□□□□ -0.59
Trav6d-7A0A075B6B0 Gm7787-201ENSMUST00000216858 688 ntBASIC11.36□□□□□ -0.59
Trav6d-7A0A075B6B0 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC11.36□□□□□ -0.59
Trav6d-7A0A075B6B0 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav6d-7A0A075B6B0 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC11.36□□□□□ -0.59
Trav6d-7A0A075B6B0 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav6d-7A0A075B6B0 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav6d-7A0A075B6B0 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav6d-7A0A075B6B0 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav6d-7A0A075B6B0 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav6d-7A0A075B6B0 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC11.36□□□□□ -0.59
Trav6d-7A0A075B6B0 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC11.36□□□□□ -0.59
Trav6d-7A0A075B6B0 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Trav6d-7A0A075B6B0 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Trav6d-7A0A075B6B0 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav6d-7A0A075B6B0 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Trav6d-7A0A075B6B0 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav6d-7A0A075B6B0 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav6d-7A0A075B6B0 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav6d-7A0A075B6B0 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC11.36□□□□□ -0.59
Trav6d-7A0A075B6B0 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav6d-7A0A075B6B0 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav6d-7A0A075B6B0 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Trav6d-7A0A075B6B0 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav6d-7A0A075B6B0 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav6d-7A0A075B6B0 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav6d-7A0A075B6B0 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav6d-7A0A075B6B0 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav6d-7A0A075B6B0 Gm11764-201ENSMUST00000120221 623 ntBASIC11.35□□□□□ -0.59
Trav6d-7A0A075B6B0 Gm11594-201ENSMUST00000122313 162 ntBASIC11.35□□□□□ -0.59
Trav6d-7A0A075B6B0 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav6d-7A0A075B6B0 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav6d-7A0A075B6B0 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Trav6d-7A0A075B6B0 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav6d-7A0A075B6B0 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC11.35□□□□□ -0.59
Trav6d-7A0A075B6B0 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC11.35□□□□□ -0.59
Trav6d-7A0A075B6B0 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav6d-7A0A075B6B0 Gm7286-201ENSMUST00000182691 1007 ntBASIC11.35□□□□□ -0.59
Trav6d-7A0A075B6B0 Gm27628-201ENSMUST00000184911 107 ntBASIC11.35□□□□□ -0.59
Trav6d-7A0A075B6B0 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
Trav6d-7A0A075B6B0 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav6d-7A0A075B6B0 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav6d-7A0A075B6B0 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav6d-7A0A075B6B0 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav6d-7A0A075B6B0 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav6d-7A0A075B6B0 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav6d-7A0A075B6B0 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav6d-7A0A075B6B0 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav6d-7A0A075B6B0 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav6d-7A0A075B6B0 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav6d-7A0A075B6B0 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC11.35□□□□□ -0.59
Trav6d-7A0A075B6B0 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav6d-7A0A075B6B0 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Trav6d-7A0A075B6B0 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav6d-7A0A075B6B0 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav6d-7A0A075B6B0 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav6d-7A0A075B6B0 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav6d-7A0A075B6B0 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav6d-7A0A075B6B0 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav6d-7A0A075B6B0 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Trav6d-7A0A075B6B0 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC11.35□□□□□ -0.59
Trav6d-7A0A075B6B0 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav6d-7A0A075B6B0 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav6d-7A0A075B6B0 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav6d-7A0A075B6B0 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav6d-7A0A075B6B0 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav6d-7A0A075B6B0 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Trav6d-7A0A075B6B0 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC11.35□□□□□ -0.59
Trav6d-7A0A075B6B0 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav6d-7A0A075B6B0 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Trav6d-7A0A075B6B0 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav6d-7A0A075B6B0 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav6d-7A0A075B6B0 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Trav6d-7A0A075B6B0 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav6d-7A0A075B6B0 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms