Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC12.04□□□□□ -0.48
Trav18A0A075B656 Gm4899-201ENSMUST00000178708 719 ntBASIC12.04□□□□□ -0.48
Trav18A0A075B656 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC12.04□□□□□ -0.48
Trav18A0A075B656 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav18A0A075B656 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC12.04□□□□□ -0.48
Trav18A0A075B656 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Trav18A0A075B656 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav18A0A075B656 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Trav18A0A075B656 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
Trav18A0A075B656 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav18A0A075B656 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav18A0A075B656 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav18A0A075B656 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav18A0A075B656 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC12.04□□□□□ -0.48
Trav18A0A075B656 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav18A0A075B656 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC12.03□□□□□ -0.48
Trav18A0A075B656 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav18A0A075B656 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC12.03□□□□□ -0.48
Trav18A0A075B656 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav18A0A075B656 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav18A0A075B656 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC12.03□□□□□ -0.48
Trav18A0A075B656 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav18A0A075B656 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav18A0A075B656 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav18A0A075B656 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav18A0A075B656 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Trav18A0A075B656 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav18A0A075B656 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav18A0A075B656 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav18A0A075B656 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC12.03□□□□□ -0.48
Trav18A0A075B656 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC12.03□□□□□ -0.48
Trav18A0A075B656 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC12.03□□□□□ -0.48
Trav18A0A075B656 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Trav18A0A075B656 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav18A0A075B656 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav18A0A075B656 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav18A0A075B656 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Trav18A0A075B656 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Trav18A0A075B656 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav18A0A075B656 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav18A0A075B656 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC12.03□□□□□ -0.48
Trav18A0A075B656 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav18A0A075B656 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC12.03□□□□□ -0.48
Trav18A0A075B656 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav18A0A075B656 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav18A0A075B656 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav18A0A075B656 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav18A0A075B656 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav18A0A075B656 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav18A0A075B656 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Trav18A0A075B656 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Trav18A0A075B656 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav18A0A075B656 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC12.02□□□□□ -0.48
Trav18A0A075B656 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav18A0A075B656 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav18A0A075B656 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav18A0A075B656 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav18A0A075B656 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav18A0A075B656 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav18A0A075B656 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav18A0A075B656 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Trav18A0A075B656 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Trav18A0A075B656 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC12.02□□□□□ -0.49
Trav18A0A075B656 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.49
Trav18A0A075B656 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav18A0A075B656 Gm11452-201ENSMUST00000122376 690 ntBASIC12.02□□□□□ -0.49
Trav18A0A075B656 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC12.02□□□□□ -0.49
Trav18A0A075B656 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav18A0A075B656 Umpk-ps-201ENSMUST00000211897 827 ntBASIC12.02□□□□□ -0.49
Trav18A0A075B656 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav18A0A075B656 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav18A0A075B656 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Trav18A0A075B656 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav18A0A075B656 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Trav18A0A075B656 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav18A0A075B656 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav18A0A075B656 AC119177.1-201ENSMUST00000227647 1332 ntBASIC12.02□□□□□ -0.49
Trav18A0A075B656 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC12.02□□□□□ -0.49
Trav18A0A075B656 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav18A0A075B656 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav18A0A075B656 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav18A0A075B656 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav18A0A075B656 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav18A0A075B656 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav18A0A075B656 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav18A0A075B656 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav18A0A075B656 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
Trav18A0A075B656 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav18A0A075B656 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav18A0A075B656 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav18A0A075B656 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav18A0A075B656 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav18A0A075B656 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav18A0A075B656 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav18A0A075B656 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav18A0A075B656 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Trav18A0A075B656 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav18A0A075B656 AC025913.2-201ENSMUST00000220136 1766 ntBASIC12.01□□□□□ -0.49
Trav18A0A075B656 Gm7862-201ENSMUST00000121461 292 ntBASIC12.01□□□□□ -0.49
Trav18A0A075B656 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms