Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav5-4A0A075B652 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Trav5-4A0A075B652 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav5-4A0A075B652 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav5-4A0A075B652 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav5-4A0A075B652 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav5-4A0A075B652 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav5-4A0A075B652 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav5-4A0A075B652 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC12.29□□□□□ -0.44
Trav5-4A0A075B652 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav5-4A0A075B652 Gm45003-201ENSMUST00000205875 2158 ntBASIC12.29□□□□□ -0.44
Trav5-4A0A075B652 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav5-4A0A075B652 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav5-4A0A075B652 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav5-4A0A075B652 Sorbs3-204ENSMUST00000227929 2460 ntBASIC12.29□□□□□ -0.44
Trav5-4A0A075B652 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav5-4A0A075B652 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav5-4A0A075B652 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav5-4A0A075B652 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav5-4A0A075B652 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav5-4A0A075B652 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav5-4A0A075B652 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav5-4A0A075B652 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav5-4A0A075B652 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Trav5-4A0A075B652 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC12.29□□□□□ -0.44
Trav5-4A0A075B652 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC12.29□□□□□ -0.44
Trav5-4A0A075B652 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC12.29□□□□□ -0.44
Trav5-4A0A075B652 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav5-4A0A075B652 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC12.29□□□□□ -0.44
Trav5-4A0A075B652 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC12.29□□□□□ -0.44
Trav5-4A0A075B652 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav5-4A0A075B652 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav5-4A0A075B652 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Trav5-4A0A075B652 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav5-4A0A075B652 Gm10313-201ENSMUST00000095320 1002 ntBASIC12.29□□□□□ -0.44
Trav5-4A0A075B652 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav5-4A0A075B652 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav5-4A0A075B652 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav5-4A0A075B652 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav5-4A0A075B652 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav5-4A0A075B652 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav5-4A0A075B652 Ntrk2-209ENSMUST00000225950 2640 ntBASIC12.29□□□□□ -0.44
Trav5-4A0A075B652 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav5-4A0A075B652 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav5-4A0A075B652 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav5-4A0A075B652 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav5-4A0A075B652 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav5-4A0A075B652 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav5-4A0A075B652 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Trav5-4A0A075B652 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
Trav5-4A0A075B652 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav5-4A0A075B652 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav5-4A0A075B652 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Trav5-4A0A075B652 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav5-4A0A075B652 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav5-4A0A075B652 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav5-4A0A075B652 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav5-4A0A075B652 AC122901.1-201ENSMUST00000214203 1790 ntBASIC12.28□□□□□ -0.44
Trav5-4A0A075B652 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav5-4A0A075B652 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav5-4A0A075B652 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Trav5-4A0A075B652 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav5-4A0A075B652 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav5-4A0A075B652 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav5-4A0A075B652 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav5-4A0A075B652 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav5-4A0A075B652 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav5-4A0A075B652 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav5-4A0A075B652 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav5-4A0A075B652 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Trav5-4A0A075B652 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav5-4A0A075B652 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC12.28□□□□□ -0.44
Trav5-4A0A075B652 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC12.28□□□□□ -0.44
Trav5-4A0A075B652 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Trav5-4A0A075B652 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC12.28□□□□□ -0.44
Trav5-4A0A075B652 Gm10060-201ENSMUST00000212002 111 ntBASIC12.28□□□□□ -0.44
Trav5-4A0A075B652 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav5-4A0A075B652 AC161829.1-201ENSMUST00000220298 281 ntBASIC12.28□□□□□ -0.44
Trav5-4A0A075B652 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC12.28□□□□□ -0.44
Trav5-4A0A075B652 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav5-4A0A075B652 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav5-4A0A075B652 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav5-4A0A075B652 Gm37691-201ENSMUST00000192147 2573 ntBASIC12.28□□□□□ -0.44
Trav5-4A0A075B652 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav5-4A0A075B652 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav5-4A0A075B652 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav5-4A0A075B652 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC12.28□□□□□ -0.44
Trav5-4A0A075B652 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav5-4A0A075B652 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC12.28□□□□□ -0.44
Trav5-4A0A075B652 Gm21009-201ENSMUST00000197169 1669 ntBASIC12.28□□□□□ -0.44
Trav5-4A0A075B652 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav5-4A0A075B652 Best4-ps-201ENSMUST00000129783 1380 ntBASIC12.28□□□□□ -0.44
Trav5-4A0A075B652 Gm42632-201ENSMUST00000201707 2411 ntBASIC12.28□□□□□ -0.44
Trav5-4A0A075B652 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Trav5-4A0A075B652 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav5-4A0A075B652 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Trav5-4A0A075B652 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav5-4A0A075B652 AC121805.2-201ENSMUST00000218808 2538 ntBASIC12.28□□□□□ -0.44
Trav5-4A0A075B652 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
Trav5-4A0A075B652 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC12.27□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 61.7 ms