Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav4n-4A0A075B615 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Trav4n-4A0A075B615 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC10.16□□□□□ -0.78
Trav4n-4A0A075B615 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav4n-4A0A075B615 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav4n-4A0A075B615 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Trav4n-4A0A075B615 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Trav4n-4A0A075B615 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav4n-4A0A075B615 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav4n-4A0A075B615 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav4n-4A0A075B615 Gm42928-201ENSMUST00000197338 3339 ntBASIC10.16□□□□□ -0.78
Trav4n-4A0A075B615 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav4n-4A0A075B615 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trav4n-4A0A075B615 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav4n-4A0A075B615 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC10.16□□□□□ -0.78
Trav4n-4A0A075B615 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC10.16□□□□□ -0.78
Trav4n-4A0A075B615 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav4n-4A0A075B615 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trav4n-4A0A075B615 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav4n-4A0A075B615 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC10.16□□□□□ -0.78
Trav4n-4A0A075B615 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trav4n-4A0A075B615 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav4n-4A0A075B615 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav4n-4A0A075B615 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav4n-4A0A075B615 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav4n-4A0A075B615 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav4n-4A0A075B615 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav4n-4A0A075B615 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav4n-4A0A075B615 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav4n-4A0A075B615 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav4n-4A0A075B615 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav4n-4A0A075B615 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC10.16□□□□□ -0.78
Trav4n-4A0A075B615 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav4n-4A0A075B615 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC10.16□□□□□ -0.78
Trav4n-4A0A075B615 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav4n-4A0A075B615 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trav4n-4A0A075B615 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trav4n-4A0A075B615 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav4n-4A0A075B615 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav4n-4A0A075B615 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC10.16□□□□□ -0.78
Trav4n-4A0A075B615 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav4n-4A0A075B615 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav4n-4A0A075B615 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trav4n-4A0A075B615 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav4n-4A0A075B615 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC10.15□□□□□ -0.78
Trav4n-4A0A075B615 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav4n-4A0A075B615 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav4n-4A0A075B615 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Trav4n-4A0A075B615 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Trav4n-4A0A075B615 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav4n-4A0A075B615 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC10.15□□□□□ -0.78
Trav4n-4A0A075B615 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav4n-4A0A075B615 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Trav4n-4A0A075B615 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav4n-4A0A075B615 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
Trav4n-4A0A075B615 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav4n-4A0A075B615 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav4n-4A0A075B615 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav4n-4A0A075B615 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC10.15□□□□□ -0.78
Trav4n-4A0A075B615 Gm16042-201ENSMUST00000204813 1247 ntBASIC10.15□□□□□ -0.78
Trav4n-4A0A075B615 Gm19164-201ENSMUST00000210667 640 ntBASIC10.15□□□□□ -0.78
Trav4n-4A0A075B615 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav4n-4A0A075B615 Gm7370-201ENSMUST00000219471 767 ntBASIC10.15□□□□□ -0.78
Trav4n-4A0A075B615 Odf3b-204ENSMUST00000227834 930 ntBASIC10.15□□□□□ -0.78
Trav4n-4A0A075B615 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav4n-4A0A075B615 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
Trav4n-4A0A075B615 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav4n-4A0A075B615 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC10.15□□□□□ -0.78
Trav4n-4A0A075B615 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav4n-4A0A075B615 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav4n-4A0A075B615 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav4n-4A0A075B615 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav4n-4A0A075B615 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav4n-4A0A075B615 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Trav4n-4A0A075B615 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Trav4n-4A0A075B615 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.79
Trav4n-4A0A075B615 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC10.15□□□□□ -0.79
Trav4n-4A0A075B615 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Trav4n-4A0A075B615 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Trav4n-4A0A075B615 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
Trav4n-4A0A075B615 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Trav4n-4A0A075B615 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC10.15□□□□□ -0.79
Trav4n-4A0A075B615 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
Trav4n-4A0A075B615 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Trav4n-4A0A075B615 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
Trav4n-4A0A075B615 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav4n-4A0A075B615 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Trav4n-4A0A075B615 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav4n-4A0A075B615 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav4n-4A0A075B615 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC10.14□□□□□ -0.79
Trav4n-4A0A075B615 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC10.14□□□□□ -0.79
Trav4n-4A0A075B615 Gm38355-201ENSMUST00000192514 1570 ntBASIC10.14□□□□□ -0.79
Trav4n-4A0A075B615 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Trav4n-4A0A075B615 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Trav4n-4A0A075B615 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav4n-4A0A075B615 Spsb2-203ENSMUST00000112473 1322 ntBASIC10.14□□□□□ -0.79
Trav4n-4A0A075B615 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
Trav4n-4A0A075B615 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav4n-4A0A075B615 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav4n-4A0A075B615 Gm14371-201ENSMUST00000138925 1518 ntBASIC10.14□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms