Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
H2afb3S4R1G7 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
H2afb3S4R1G7 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
H2afb3S4R1G7 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
H2afb3S4R1G7 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC13.24□□□□□ -0.29
H2afb3S4R1G7 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
H2afb3S4R1G7 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
H2afb3S4R1G7 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
H2afb3S4R1G7 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
H2afb3S4R1G7 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
H2afb3S4R1G7 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC13.24□□□□□ -0.29
H2afb3S4R1G7 Gm15173-201ENSMUST00000122049 433 ntBASIC13.24□□□□□ -0.29
H2afb3S4R1G7 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC13.24□□□□□ -0.29
H2afb3S4R1G7 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC13.24□□□□□ -0.29
H2afb3S4R1G7 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
H2afb3S4R1G7 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
H2afb3S4R1G7 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
H2afb3S4R1G7 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
H2afb3S4R1G7 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
H2afb3S4R1G7 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
H2afb3S4R1G7 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
H2afb3S4R1G7 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
H2afb3S4R1G7 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
H2afb3S4R1G7 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
H2afb3S4R1G7 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
H2afb3S4R1G7 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
H2afb3S4R1G7 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
H2afb3S4R1G7 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
H2afb3S4R1G7 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
H2afb3S4R1G7 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
H2afb3S4R1G7 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
H2afb3S4R1G7 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
H2afb3S4R1G7 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
H2afb3S4R1G7 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
H2afb3S4R1G7 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
H2afb3S4R1G7 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
H2afb3S4R1G7 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
H2afb3S4R1G7 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
H2afb3S4R1G7 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
H2afb3S4R1G7 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
H2afb3S4R1G7 Gm24589-201ENSMUST00000116692 94 ntBASIC13.23□□□□□ -0.29
H2afb3S4R1G7 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
H2afb3S4R1G7 Gm6550-201ENSMUST00000187574 993 ntBASIC13.23□□□□□ -0.29
H2afb3S4R1G7 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
H2afb3S4R1G7 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
H2afb3S4R1G7 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC13.23□□□□□ -0.29
H2afb3S4R1G7 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
H2afb3S4R1G7 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
H2afb3S4R1G7 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC13.23□□□□□ -0.29
H2afb3S4R1G7 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
H2afb3S4R1G7 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
H2afb3S4R1G7 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
H2afb3S4R1G7 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
H2afb3S4R1G7 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
H2afb3S4R1G7 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
H2afb3S4R1G7 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
H2afb3S4R1G7 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
H2afb3S4R1G7 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
H2afb3S4R1G7 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
H2afb3S4R1G7 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
H2afb3S4R1G7 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
H2afb3S4R1G7 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
H2afb3S4R1G7 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
H2afb3S4R1G7 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
H2afb3S4R1G7 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
H2afb3S4R1G7 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
H2afb3S4R1G7 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
H2afb3S4R1G7 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC13.22□□□□□ -0.29
H2afb3S4R1G7 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
H2afb3S4R1G7 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
H2afb3S4R1G7 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
H2afb3S4R1G7 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
H2afb3S4R1G7 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
H2afb3S4R1G7 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
H2afb3S4R1G7 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
H2afb3S4R1G7 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC13.22□□□□□ -0.29
H2afb3S4R1G7 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
H2afb3S4R1G7 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
H2afb3S4R1G7 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC13.22□□□□□ -0.29
H2afb3S4R1G7 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
H2afb3S4R1G7 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
H2afb3S4R1G7 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
H2afb3S4R1G7 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
H2afb3S4R1G7 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC13.22□□□□□ -0.29
H2afb3S4R1G7 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
H2afb3S4R1G7 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC13.22□□□□□ -0.29
H2afb3S4R1G7 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
H2afb3S4R1G7 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
H2afb3S4R1G7 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
H2afb3S4R1G7 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
H2afb3S4R1G7 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
H2afb3S4R1G7 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC13.22□□□□□ -0.29
H2afb3S4R1G7 Pcgf5-211ENSMUST00000225920 6443 ntBASIC13.22□□□□□ -0.29
H2afb3S4R1G7 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
H2afb3S4R1G7 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
H2afb3S4R1G7 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
H2afb3S4R1G7 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
H2afb3S4R1G7 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
H2afb3S4R1G7 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
H2afb3S4R1G7 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms