Protein–RNA interactions for Protein: Q9Z0Y9

Nr1h3, Oxysterols receptor LXR-alpha, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h3Q9Z0Y9 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC15.97■□□□□ 0.15
Nr1h3Q9Z0Y9 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Nr1h3Q9Z0Y9 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Nr1h3Q9Z0Y9 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Nr1h3Q9Z0Y9 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Nr1h3Q9Z0Y9 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Nr1h3Q9Z0Y9 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Nr1h3Q9Z0Y9 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Nr1h3Q9Z0Y9 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Nr1h3Q9Z0Y9 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Nr1h3Q9Z0Y9 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC15.97■□□□□ 0.15
Nr1h3Q9Z0Y9 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Nr1h3Q9Z0Y9 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Nr1h3Q9Z0Y9 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Nr1h3Q9Z0Y9 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Nr1h3Q9Z0Y9 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Nr1h3Q9Z0Y9 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Nr1h3Q9Z0Y9 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Nr1h3Q9Z0Y9 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Nr1h3Q9Z0Y9 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Nr1h3Q9Z0Y9 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Nr1h3Q9Z0Y9 Gm13015-201ENSMUST00000118674 204 ntBASIC15.96■□□□□ 0.15
Nr1h3Q9Z0Y9 Gm6539-201ENSMUST00000119157 1064 ntBASIC15.96■□□□□ 0.15
Nr1h3Q9Z0Y9 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Nr1h3Q9Z0Y9 Gm23547-201ENSMUST00000158210 271 ntBASIC15.96■□□□□ 0.15
Nr1h3Q9Z0Y9 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Nr1h3Q9Z0Y9 Ighv8-7-201ENSMUST00000194349 297 ntBASIC15.96■□□□□ 0.15
Nr1h3Q9Z0Y9 Gm43767-201ENSMUST00000198933 381 ntBASIC15.96■□□□□ 0.15
Nr1h3Q9Z0Y9 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Nr1h3Q9Z0Y9 Wdyhv1-203ENSMUST00000226889 394 ntBASIC15.96■□□□□ 0.15
Nr1h3Q9Z0Y9 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Nr1h3Q9Z0Y9 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Nr1h3Q9Z0Y9 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Nr1h3Q9Z0Y9 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Nr1h3Q9Z0Y9 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Nr1h3Q9Z0Y9 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC15.96■□□□□ 0.15
Nr1h3Q9Z0Y9 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
Nr1h3Q9Z0Y9 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Nr1h3Q9Z0Y9 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Nr1h3Q9Z0Y9 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC15.96■□□□□ 0.15
Nr1h3Q9Z0Y9 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Nr1h3Q9Z0Y9 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Nr1h3Q9Z0Y9 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC15.96■□□□□ 0.14
Nr1h3Q9Z0Y9 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Nr1h3Q9Z0Y9 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Nr1h3Q9Z0Y9 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Nr1h3Q9Z0Y9 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Nr1h3Q9Z0Y9 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Nr1h3Q9Z0Y9 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Nr1h3Q9Z0Y9 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC15.95■□□□□ 0.14
Nr1h3Q9Z0Y9 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Nr1h3Q9Z0Y9 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Nr1h3Q9Z0Y9 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Nr1h3Q9Z0Y9 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Nr1h3Q9Z0Y9 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Nr1h3Q9Z0Y9 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Nr1h3Q9Z0Y9 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Nr1h3Q9Z0Y9 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Nr1h3Q9Z0Y9 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Nr1h3Q9Z0Y9 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Nr1h3Q9Z0Y9 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Nr1h3Q9Z0Y9 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Nr1h3Q9Z0Y9 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Nr1h3Q9Z0Y9 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC15.95■□□□□ 0.14
Nr1h3Q9Z0Y9 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Nr1h3Q9Z0Y9 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC15.95■□□□□ 0.14
Nr1h3Q9Z0Y9 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Nr1h3Q9Z0Y9 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Nr1h3Q9Z0Y9 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Nr1h3Q9Z0Y9 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Nr1h3Q9Z0Y9 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Nr1h3Q9Z0Y9 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC15.95■□□□□ 0.14
Nr1h3Q9Z0Y9 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Nr1h3Q9Z0Y9 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Nr1h3Q9Z0Y9 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Nr1h3Q9Z0Y9 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Nr1h3Q9Z0Y9 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Nr1h3Q9Z0Y9 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Nr1h3Q9Z0Y9 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Nr1h3Q9Z0Y9 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Nr1h3Q9Z0Y9 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC15.95■□□□□ 0.14
Nr1h3Q9Z0Y9 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Nr1h3Q9Z0Y9 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Nr1h3Q9Z0Y9 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Nr1h3Q9Z0Y9 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Nr1h3Q9Z0Y9 Gm42466-201ENSMUST00000202099 1301 ntBASIC15.94■□□□□ 0.14
Nr1h3Q9Z0Y9 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Nr1h3Q9Z0Y9 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Nr1h3Q9Z0Y9 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Nr1h3Q9Z0Y9 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Nr1h3Q9Z0Y9 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Nr1h3Q9Z0Y9 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
Nr1h3Q9Z0Y9 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Nr1h3Q9Z0Y9 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Nr1h3Q9Z0Y9 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Nr1h3Q9Z0Y9 Gm29541-201ENSMUST00000191351 678 ntBASIC15.94■□□□□ 0.14
Nr1h3Q9Z0Y9 Gm38294-201ENSMUST00000192831 381 ntBASIC15.94■□□□□ 0.14
Nr1h3Q9Z0Y9 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Nr1h3Q9Z0Y9 Klk2-ps-201ENSMUST00000205342 571 ntBASIC15.94■□□□□ 0.14
Nr1h3Q9Z0Y9 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC15.94■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms