Protein–RNA interactions for Protein: Q9Z0H8

Clip2, CAP-Gly domain-containing linker protein 2, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip2Q9Z0H8 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clip2Q9Z0H8 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clip2Q9Z0H8 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clip2Q9Z0H8 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clip2Q9Z0H8 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Clip2Q9Z0H8 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC17.1■□□□□ 0.33
Clip2Q9Z0H8 Gm18049-201ENSMUST00000208909 581 ntBASIC17.1■□□□□ 0.33
Clip2Q9Z0H8 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clip2Q9Z0H8 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC17.1■□□□□ 0.33
Clip2Q9Z0H8 AC158529.1-201ENSMUST00000223618 239 ntBASIC17.1■□□□□ 0.33
Clip2Q9Z0H8 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Clip2Q9Z0H8 AC154767.3-201ENSMUST00000225150 1342 ntBASIC17.1■□□□□ 0.33
Clip2Q9Z0H8 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Clip2Q9Z0H8 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clip2Q9Z0H8 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clip2Q9Z0H8 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clip2Q9Z0H8 Gm6756-201ENSMUST00000180647 1620 ntBASIC17.1■□□□□ 0.33
Clip2Q9Z0H8 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clip2Q9Z0H8 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Clip2Q9Z0H8 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clip2Q9Z0H8 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clip2Q9Z0H8 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Clip2Q9Z0H8 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clip2Q9Z0H8 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clip2Q9Z0H8 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Clip2Q9Z0H8 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clip2Q9Z0H8 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Clip2Q9Z0H8 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clip2Q9Z0H8 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clip2Q9Z0H8 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clip2Q9Z0H8 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clip2Q9Z0H8 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clip2Q9Z0H8 AA543401-201ENSMUST00000164248 1269 ntBASIC17.09■□□□□ 0.33
Clip2Q9Z0H8 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC17.09■□□□□ 0.33
Clip2Q9Z0H8 Auts2-212ENSMUST00000178555 309 ntBASIC17.09■□□□□ 0.33
Clip2Q9Z0H8 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clip2Q9Z0H8 Gm9726-201ENSMUST00000180321 678 ntBASIC17.09■□□□□ 0.33
Clip2Q9Z0H8 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clip2Q9Z0H8 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
Clip2Q9Z0H8 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Clip2Q9Z0H8 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clip2Q9Z0H8 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clip2Q9Z0H8 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Clip2Q9Z0H8 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Clip2Q9Z0H8 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Clip2Q9Z0H8 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clip2Q9Z0H8 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clip2Q9Z0H8 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Clip2Q9Z0H8 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clip2Q9Z0H8 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC17.09■□□□□ 0.33
Clip2Q9Z0H8 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clip2Q9Z0H8 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clip2Q9Z0H8 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clip2Q9Z0H8 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clip2Q9Z0H8 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clip2Q9Z0H8 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Clip2Q9Z0H8 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Clip2Q9Z0H8 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Clip2Q9Z0H8 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC17.08■□□□□ 0.33
Clip2Q9Z0H8 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Clip2Q9Z0H8 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC17.08■□□□□ 0.33
Clip2Q9Z0H8 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC17.08■□□□□ 0.33
Clip2Q9Z0H8 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Clip2Q9Z0H8 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Clip2Q9Z0H8 Gm42466-201ENSMUST00000202099 1301 ntBASIC17.08■□□□□ 0.32
Clip2Q9Z0H8 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Clip2Q9Z0H8 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Clip2Q9Z0H8 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Clip2Q9Z0H8 Gm10576-201ENSMUST00000191927 825 ntBASIC17.08■□□□□ 0.32
Clip2Q9Z0H8 AC159114.1-201ENSMUST00000220349 266 ntBASIC17.08■□□□□ 0.32
Clip2Q9Z0H8 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Clip2Q9Z0H8 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
Clip2Q9Z0H8 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Clip2Q9Z0H8 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Clip2Q9Z0H8 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Clip2Q9Z0H8 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Clip2Q9Z0H8 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
Clip2Q9Z0H8 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Clip2Q9Z0H8 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Clip2Q9Z0H8 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Clip2Q9Z0H8 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Clip2Q9Z0H8 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clip2Q9Z0H8 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Clip2Q9Z0H8 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clip2Q9Z0H8 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC17.07■□□□□ 0.32
Clip2Q9Z0H8 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Clip2Q9Z0H8 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clip2Q9Z0H8 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clip2Q9Z0H8 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clip2Q9Z0H8 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Clip2Q9Z0H8 Gm6415-201ENSMUST00000118488 348 ntBASIC17.07■□□□□ 0.32
Clip2Q9Z0H8 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Clip2Q9Z0H8 Gm29541-201ENSMUST00000191351 678 ntBASIC17.07■□□□□ 0.32
Clip2Q9Z0H8 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Clip2Q9Z0H8 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Clip2Q9Z0H8 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clip2Q9Z0H8 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clip2Q9Z0H8 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clip2Q9Z0H8 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clip2Q9Z0H8 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms