Protein–RNA interactions for Protein: Q9R1N9

Col13a1, Collagen alpha-1(XIII) chain, mousemouse

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col13a1Q9R1N9 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Col13a1Q9R1N9 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Col13a1Q9R1N9 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Col13a1Q9R1N9 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Col13a1Q9R1N9 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Col13a1Q9R1N9 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Col13a1Q9R1N9 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col13a1Q9R1N9 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col13a1Q9R1N9 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Col13a1Q9R1N9 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col13a1Q9R1N9 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Col13a1Q9R1N9 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col13a1Q9R1N9 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC12.52□□□□□ -0.41
Col13a1Q9R1N9 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC12.52□□□□□ -0.41
Col13a1Q9R1N9 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC12.52□□□□□ -0.41
Col13a1Q9R1N9 Gm8602-201ENSMUST00000184045 607 ntBASIC12.52□□□□□ -0.41
Col13a1Q9R1N9 Gm27838-201ENSMUST00000184829 128 ntBASIC12.52□□□□□ -0.41
Col13a1Q9R1N9 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Col13a1Q9R1N9 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC12.52□□□□□ -0.41
Col13a1Q9R1N9 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC12.52□□□□□ -0.41
Col13a1Q9R1N9 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col13a1Q9R1N9 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col13a1Q9R1N9 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col13a1Q9R1N9 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Col13a1Q9R1N9 Gm9899-201ENSMUST00000065519 555 ntBASIC12.52□□□□□ -0.41
Col13a1Q9R1N9 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col13a1Q9R1N9 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC12.52□□□□□ -0.41
Col13a1Q9R1N9 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col13a1Q9R1N9 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC12.52□□□□□ -0.41
Col13a1Q9R1N9 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col13a1Q9R1N9 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col13a1Q9R1N9 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Col13a1Q9R1N9 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC12.52□□□□□ -0.41
Col13a1Q9R1N9 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col13a1Q9R1N9 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Col13a1Q9R1N9 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col13a1Q9R1N9 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col13a1Q9R1N9 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Col13a1Q9R1N9 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col13a1Q9R1N9 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Col13a1Q9R1N9 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Col13a1Q9R1N9 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col13a1Q9R1N9 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col13a1Q9R1N9 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col13a1Q9R1N9 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col13a1Q9R1N9 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC12.52□□□□□ -0.41
Col13a1Q9R1N9 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Col13a1Q9R1N9 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col13a1Q9R1N9 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col13a1Q9R1N9 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Col13a1Q9R1N9 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Col13a1Q9R1N9 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col13a1Q9R1N9 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col13a1Q9R1N9 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col13a1Q9R1N9 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col13a1Q9R1N9 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Col13a1Q9R1N9 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Col13a1Q9R1N9 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col13a1Q9R1N9 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Col13a1Q9R1N9 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col13a1Q9R1N9 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Col13a1Q9R1N9 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Col13a1Q9R1N9 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col13a1Q9R1N9 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col13a1Q9R1N9 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC12.51□□□□□ -0.41
Col13a1Q9R1N9 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col13a1Q9R1N9 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col13a1Q9R1N9 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC12.51□□□□□ -0.41
Col13a1Q9R1N9 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col13a1Q9R1N9 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col13a1Q9R1N9 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Col13a1Q9R1N9 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Col13a1Q9R1N9 Gm18062-201ENSMUST00000208020 547 ntBASIC12.51□□□□□ -0.41
Col13a1Q9R1N9 Gm18055-201ENSMUST00000208254 547 ntBASIC12.51□□□□□ -0.41
Col13a1Q9R1N9 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC12.51□□□□□ -0.41
Col13a1Q9R1N9 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col13a1Q9R1N9 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col13a1Q9R1N9 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Col13a1Q9R1N9 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col13a1Q9R1N9 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col13a1Q9R1N9 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Col13a1Q9R1N9 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col13a1Q9R1N9 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col13a1Q9R1N9 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Col13a1Q9R1N9 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col13a1Q9R1N9 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Col13a1Q9R1N9 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Col13a1Q9R1N9 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Col13a1Q9R1N9 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Col13a1Q9R1N9 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC12.5□□□□□ -0.41
Col13a1Q9R1N9 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col13a1Q9R1N9 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col13a1Q9R1N9 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col13a1Q9R1N9 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col13a1Q9R1N9 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Col13a1Q9R1N9 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC12.5□□□□□ -0.41
Col13a1Q9R1N9 Gm14767-201ENSMUST00000121559 586 ntBASIC12.5□□□□□ -0.41
Col13a1Q9R1N9 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Col13a1Q9R1N9 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC12.5□□□□□ -0.41
Col13a1Q9R1N9 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms