Protein–RNA interactions for Protein: Q9DCN7

Rnft1, E3 ubiquitin-protein ligase RNFT1, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnft1Q9DCN7 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rnft1Q9DCN7 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnft1Q9DCN7 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC14.38□□□□□ -0.11
Rnft1Q9DCN7 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnft1Q9DCN7 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnft1Q9DCN7 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnft1Q9DCN7 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnft1Q9DCN7 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rnft1Q9DCN7 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnft1Q9DCN7 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Rnft1Q9DCN7 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnft1Q9DCN7 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rnft1Q9DCN7 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnft1Q9DCN7 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rnft1Q9DCN7 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Rnft1Q9DCN7 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC14.38□□□□□ -0.11
Rnft1Q9DCN7 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC14.38□□□□□ -0.11
Rnft1Q9DCN7 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC14.38□□□□□ -0.11
Rnft1Q9DCN7 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rnft1Q9DCN7 Gm5682-201ENSMUST00000173402 505 ntBASIC14.38□□□□□ -0.11
Rnft1Q9DCN7 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Rnft1Q9DCN7 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rnft1Q9DCN7 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Rnft1Q9DCN7 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnft1Q9DCN7 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnft1Q9DCN7 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC14.38□□□□□ -0.11
Rnft1Q9DCN7 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnft1Q9DCN7 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnft1Q9DCN7 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.38□□□□□ -0.11
Rnft1Q9DCN7 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rnft1Q9DCN7 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnft1Q9DCN7 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnft1Q9DCN7 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC14.38□□□□□ -0.11
Rnft1Q9DCN7 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC14.38□□□□□ -0.11
Rnft1Q9DCN7 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnft1Q9DCN7 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnft1Q9DCN7 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnft1Q9DCN7 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnft1Q9DCN7 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnft1Q9DCN7 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnft1Q9DCN7 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnft1Q9DCN7 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnft1Q9DCN7 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rnft1Q9DCN7 Trav13-3-201ENSMUST00000117226 336 ntBASIC14.37□□□□□ -0.11
Rnft1Q9DCN7 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rnft1Q9DCN7 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC14.37□□□□□ -0.11
Rnft1Q9DCN7 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC14.37□□□□□ -0.11
Rnft1Q9DCN7 Gm44357-201ENSMUST00000195897 142 ntBASIC14.37□□□□□ -0.11
Rnft1Q9DCN7 Gm19658-201ENSMUST00000196231 138 ntBASIC14.37□□□□□ -0.11
Rnft1Q9DCN7 Gm44367-201ENSMUST00000196836 138 ntBASIC14.37□□□□□ -0.11
Rnft1Q9DCN7 Gm44350-201ENSMUST00000197197 138 ntBASIC14.37□□□□□ -0.11
Rnft1Q9DCN7 Gm44390-201ENSMUST00000197533 144 ntBASIC14.37□□□□□ -0.11
Rnft1Q9DCN7 Gm6089-201ENSMUST00000197666 938 ntBASIC14.37□□□□□ -0.11
Rnft1Q9DCN7 Gm44313-201ENSMUST00000198018 138 ntBASIC14.37□□□□□ -0.11
Rnft1Q9DCN7 Gm44486-201ENSMUST00000198508 138 ntBASIC14.37□□□□□ -0.11
Rnft1Q9DCN7 Gm44314-201ENSMUST00000199263 138 ntBASIC14.37□□□□□ -0.11
Rnft1Q9DCN7 Gm44394-201ENSMUST00000199558 138 ntBASIC14.37□□□□□ -0.11
Rnft1Q9DCN7 Gm44484-201ENSMUST00000199873 138 ntBASIC14.37□□□□□ -0.11
Rnft1Q9DCN7 Gm44466-201ENSMUST00000200264 138 ntBASIC14.37□□□□□ -0.11
Rnft1Q9DCN7 Gm44359-201ENSMUST00000200671 138 ntBASIC14.37□□□□□ -0.11
Rnft1Q9DCN7 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnft1Q9DCN7 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnft1Q9DCN7 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnft1Q9DCN7 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnft1Q9DCN7 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnft1Q9DCN7 Gm37500-201ENSMUST00000192059 1443 ntBASIC14.37□□□□□ -0.11
Rnft1Q9DCN7 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnft1Q9DCN7 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnft1Q9DCN7 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnft1Q9DCN7 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnft1Q9DCN7 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Rnft1Q9DCN7 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnft1Q9DCN7 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnft1Q9DCN7 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnft1Q9DCN7 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnft1Q9DCN7 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnft1Q9DCN7 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnft1Q9DCN7 AC130669.1-201ENSMUST00000228537 1672 ntBASIC14.36□□□□□ -0.11
Rnft1Q9DCN7 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnft1Q9DCN7 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.36□□□□□ -0.11
Rnft1Q9DCN7 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rnft1Q9DCN7 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Rnft1Q9DCN7 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnft1Q9DCN7 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
Rnft1Q9DCN7 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Rnft1Q9DCN7 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnft1Q9DCN7 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Rnft1Q9DCN7 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnft1Q9DCN7 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnft1Q9DCN7 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Rnft1Q9DCN7 Gm18669-201ENSMUST00000216049 778 ntBASIC14.36□□□□□ -0.11
Rnft1Q9DCN7 Gm7787-201ENSMUST00000216858 688 ntBASIC14.36□□□□□ -0.11
Rnft1Q9DCN7 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Rnft1Q9DCN7 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC14.36□□□□□ -0.11
Rnft1Q9DCN7 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnft1Q9DCN7 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rnft1Q9DCN7 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnft1Q9DCN7 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnft1Q9DCN7 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnft1Q9DCN7 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms