Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC19.31■□□□□ 0.68
U2af1Q9D883 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
U2af1Q9D883 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
U2af1Q9D883 Camk2g-217ENSMUST00000226630 1937 ntBASIC19.31■□□□□ 0.68
U2af1Q9D883 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
U2af1Q9D883 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
U2af1Q9D883 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
U2af1Q9D883 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
U2af1Q9D883 Gm42466-201ENSMUST00000202099 1301 ntBASIC19.3■□□□□ 0.68
U2af1Q9D883 AC154767.3-201ENSMUST00000225150 1342 ntBASIC19.3■□□□□ 0.68
U2af1Q9D883 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
U2af1Q9D883 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
U2af1Q9D883 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
U2af1Q9D883 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
U2af1Q9D883 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
U2af1Q9D883 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC19.3■□□□□ 0.68
U2af1Q9D883 Gm7336-201ENSMUST00000107041 1232 ntBASIC19.3■□□□□ 0.68
U2af1Q9D883 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
U2af1Q9D883 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
U2af1Q9D883 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC19.3■□□□□ 0.68
U2af1Q9D883 Gm29541-201ENSMUST00000191351 678 ntBASIC19.3■□□□□ 0.68
U2af1Q9D883 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
U2af1Q9D883 Gm18049-201ENSMUST00000208909 581 ntBASIC19.3■□□□□ 0.68
U2af1Q9D883 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
U2af1Q9D883 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
U2af1Q9D883 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
U2af1Q9D883 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
U2af1Q9D883 Carlr-201ENSMUST00000181515 2574 ntBASIC19.3■□□□□ 0.68
U2af1Q9D883 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
U2af1Q9D883 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
U2af1Q9D883 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
U2af1Q9D883 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
U2af1Q9D883 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
U2af1Q9D883 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
U2af1Q9D883 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
U2af1Q9D883 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC19.29■□□□□ 0.68
U2af1Q9D883 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
U2af1Q9D883 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
U2af1Q9D883 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
U2af1Q9D883 Gm15920-201ENSMUST00000118998 402 ntBASIC19.29■□□□□ 0.68
U2af1Q9D883 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
U2af1Q9D883 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC19.29■□□□□ 0.68
U2af1Q9D883 AC124732.2-201ENSMUST00000221977 316 ntBASIC19.29■□□□□ 0.68
U2af1Q9D883 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
U2af1Q9D883 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
U2af1Q9D883 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
U2af1Q9D883 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
U2af1Q9D883 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
U2af1Q9D883 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
U2af1Q9D883 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
U2af1Q9D883 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
U2af1Q9D883 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
U2af1Q9D883 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
U2af1Q9D883 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
U2af1Q9D883 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
U2af1Q9D883 Gm5357-201ENSMUST00000212720 1924 ntBASIC19.29■□□□□ 0.68
U2af1Q9D883 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
U2af1Q9D883 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
U2af1Q9D883 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
U2af1Q9D883 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
U2af1Q9D883 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
U2af1Q9D883 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
U2af1Q9D883 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC19.28■□□□□ 0.68
U2af1Q9D883 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
U2af1Q9D883 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
U2af1Q9D883 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
U2af1Q9D883 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
U2af1Q9D883 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
U2af1Q9D883 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
U2af1Q9D883 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
U2af1Q9D883 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
U2af1Q9D883 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC19.28■□□□□ 0.68
U2af1Q9D883 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
U2af1Q9D883 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC19.28■□□□□ 0.68
U2af1Q9D883 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
U2af1Q9D883 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
U2af1Q9D883 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
U2af1Q9D883 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
U2af1Q9D883 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
U2af1Q9D883 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
U2af1Q9D883 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
U2af1Q9D883 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
U2af1Q9D883 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
U2af1Q9D883 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
U2af1Q9D883 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
U2af1Q9D883 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
U2af1Q9D883 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
U2af1Q9D883 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
U2af1Q9D883 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
U2af1Q9D883 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
U2af1Q9D883 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
U2af1Q9D883 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
U2af1Q9D883 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
U2af1Q9D883 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC19.27■□□□□ 0.68
U2af1Q9D883 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
U2af1Q9D883 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
U2af1Q9D883 Gm6415-201ENSMUST00000118488 348 ntBASIC19.27■□□□□ 0.68
U2af1Q9D883 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC19.27■□□□□ 0.68
U2af1Q9D883 Gm37230-201ENSMUST00000194491 818 ntBASIC19.27■□□□□ 0.68
U2af1Q9D883 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms