Protein–RNA interactions for Protein: Q9D7S9

Chmp5, Charged multivesicular body protein 5, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp5Q9D7S9 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Chmp5Q9D7S9 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC18.39■□□□□ 0.53
Chmp5Q9D7S9 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC18.39■□□□□ 0.53
Chmp5Q9D7S9 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Chmp5Q9D7S9 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Chmp5Q9D7S9 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Chmp5Q9D7S9 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC18.39■□□□□ 0.53
Chmp5Q9D7S9 AC154757.1-201ENSMUST00000228289 336 ntBASIC18.39■□□□□ 0.53
Chmp5Q9D7S9 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Chmp5Q9D7S9 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Chmp5Q9D7S9 Gm3928-201ENSMUST00000121141 1307 ntBASIC18.39■□□□□ 0.53
Chmp5Q9D7S9 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Chmp5Q9D7S9 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Chmp5Q9D7S9 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Chmp5Q9D7S9 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC18.39■□□□□ 0.53
Chmp5Q9D7S9 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Chmp5Q9D7S9 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Chmp5Q9D7S9 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Chmp5Q9D7S9 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Chmp5Q9D7S9 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Chmp5Q9D7S9 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Chmp5Q9D7S9 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Chmp5Q9D7S9 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chmp5Q9D7S9 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Chmp5Q9D7S9 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chmp5Q9D7S9 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
Chmp5Q9D7S9 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chmp5Q9D7S9 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Chmp5Q9D7S9 AC166574.6-201ENSMUST00000227889 1806 ntBASIC18.38■□□□□ 0.53
Chmp5Q9D7S9 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Chmp5Q9D7S9 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC18.38■□□□□ 0.53
Chmp5Q9D7S9 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC18.38■□□□□ 0.53
Chmp5Q9D7S9 Gm6089-201ENSMUST00000197666 938 ntBASIC18.38■□□□□ 0.53
Chmp5Q9D7S9 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chmp5Q9D7S9 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chmp5Q9D7S9 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC18.38■□□□□ 0.53
Chmp5Q9D7S9 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
Chmp5Q9D7S9 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chmp5Q9D7S9 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chmp5Q9D7S9 Gm43056-201ENSMUST00000197865 2791 ntBASIC18.38■□□□□ 0.53
Chmp5Q9D7S9 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC18.38■□□□□ 0.53
Chmp5Q9D7S9 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Chmp5Q9D7S9 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Chmp5Q9D7S9 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chmp5Q9D7S9 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Chmp5Q9D7S9 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Chmp5Q9D7S9 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chmp5Q9D7S9 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chmp5Q9D7S9 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chmp5Q9D7S9 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chmp5Q9D7S9 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chmp5Q9D7S9 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chmp5Q9D7S9 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chmp5Q9D7S9 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC18.37■□□□□ 0.53
Chmp5Q9D7S9 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chmp5Q9D7S9 Trav13-3-201ENSMUST00000117226 336 ntBASIC18.37■□□□□ 0.53
Chmp5Q9D7S9 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Chmp5Q9D7S9 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC18.37■□□□□ 0.53
Chmp5Q9D7S9 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Chmp5Q9D7S9 Gm44357-201ENSMUST00000195897 142 ntBASIC18.37■□□□□ 0.53
Chmp5Q9D7S9 Gm19658-201ENSMUST00000196231 138 ntBASIC18.37■□□□□ 0.53
Chmp5Q9D7S9 Gm44367-201ENSMUST00000196836 138 ntBASIC18.37■□□□□ 0.53
Chmp5Q9D7S9 Gm44350-201ENSMUST00000197197 138 ntBASIC18.37■□□□□ 0.53
Chmp5Q9D7S9 Gm44390-201ENSMUST00000197533 144 ntBASIC18.37■□□□□ 0.53
Chmp5Q9D7S9 Gm44313-201ENSMUST00000198018 138 ntBASIC18.37■□□□□ 0.53
Chmp5Q9D7S9 Gm44486-201ENSMUST00000198508 138 ntBASIC18.37■□□□□ 0.53
Chmp5Q9D7S9 Gm44314-201ENSMUST00000199263 138 ntBASIC18.37■□□□□ 0.53
Chmp5Q9D7S9 Gm44394-201ENSMUST00000199558 138 ntBASIC18.37■□□□□ 0.53
Chmp5Q9D7S9 Gm44484-201ENSMUST00000199873 138 ntBASIC18.37■□□□□ 0.53
Chmp5Q9D7S9 Gm44466-201ENSMUST00000200264 138 ntBASIC18.37■□□□□ 0.53
Chmp5Q9D7S9 Gm44359-201ENSMUST00000200671 138 ntBASIC18.37■□□□□ 0.53
Chmp5Q9D7S9 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC18.37■□□□□ 0.53
Chmp5Q9D7S9 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Chmp5Q9D7S9 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Chmp5Q9D7S9 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chmp5Q9D7S9 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Chmp5Q9D7S9 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chmp5Q9D7S9 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC18.37■□□□□ 0.53
Chmp5Q9D7S9 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chmp5Q9D7S9 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chmp5Q9D7S9 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chmp5Q9D7S9 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Chmp5Q9D7S9 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chmp5Q9D7S9 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chmp5Q9D7S9 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chmp5Q9D7S9 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chmp5Q9D7S9 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chmp5Q9D7S9 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Chmp5Q9D7S9 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC18.36■□□□□ 0.53
Chmp5Q9D7S9 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chmp5Q9D7S9 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC18.36■□□□□ 0.53
Chmp5Q9D7S9 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chmp5Q9D7S9 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chmp5Q9D7S9 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC18.36■□□□□ 0.53
Chmp5Q9D7S9 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC18.36■□□□□ 0.53
Chmp5Q9D7S9 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Chmp5Q9D7S9 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Chmp5Q9D7S9 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chmp5Q9D7S9 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chmp5Q9D7S9 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC18.36■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms