Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Gm13559-201ENSMUST00000120476 863 ntBASIC14.92□□□□□ -0.02
Sf3a3Q9D554 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Sf3a3Q9D554 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Sf3a3Q9D554 Gm7889-201ENSMUST00000185591 958 ntBASIC14.92□□□□□ -0.02
Sf3a3Q9D554 AL672049.1-201ENSMUST00000197943 91 ntBASIC14.92□□□□□ -0.02
Sf3a3Q9D554 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC14.92□□□□□ -0.02
Sf3a3Q9D554 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Sf3a3Q9D554 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sf3a3Q9D554 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sf3a3Q9D554 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sf3a3Q9D554 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sf3a3Q9D554 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Sf3a3Q9D554 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
Sf3a3Q9D554 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Sf3a3Q9D554 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Sf3a3Q9D554 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sf3a3Q9D554 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sf3a3Q9D554 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Sf3a3Q9D554 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sf3a3Q9D554 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Sf3a3Q9D554 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC14.91□□□□□ -0.02
Sf3a3Q9D554 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sf3a3Q9D554 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Sf3a3Q9D554 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sf3a3Q9D554 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC14.91□□□□□ -0.02
Sf3a3Q9D554 Gm8349-201ENSMUST00000182720 1003 ntBASIC14.91□□□□□ -0.02
Sf3a3Q9D554 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sf3a3Q9D554 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Sf3a3Q9D554 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Sf3a3Q9D554 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Sf3a3Q9D554 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC14.91□□□□□ -0.02
Sf3a3Q9D554 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sf3a3Q9D554 Gm26513-201ENSMUST00000181802 2489 ntBASIC14.91□□□□□ -0.02
Sf3a3Q9D554 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sf3a3Q9D554 Celf4-206ENSMUST00000224553 1729 ntBASIC14.91□□□□□ -0.02
Sf3a3Q9D554 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sf3a3Q9D554 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sf3a3Q9D554 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sf3a3Q9D554 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sf3a3Q9D554 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sf3a3Q9D554 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sf3a3Q9D554 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sf3a3Q9D554 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
Sf3a3Q9D554 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sf3a3Q9D554 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sf3a3Q9D554 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sf3a3Q9D554 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Sf3a3Q9D554 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sf3a3Q9D554 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sf3a3Q9D554 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Sf3a3Q9D554 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sf3a3Q9D554 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sf3a3Q9D554 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC14.9□□□□□ -0.02
Sf3a3Q9D554 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC14.9□□□□□ -0.02
Sf3a3Q9D554 Gm29257-201ENSMUST00000186115 639 ntBASIC14.9□□□□□ -0.02
Sf3a3Q9D554 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sf3a3Q9D554 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Sf3a3Q9D554 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sf3a3Q9D554 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sf3a3Q9D554 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sf3a3Q9D554 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Sf3a3Q9D554 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Sf3a3Q9D554 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Sf3a3Q9D554 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sf3a3Q9D554 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sf3a3Q9D554 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Sf3a3Q9D554 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sf3a3Q9D554 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sf3a3Q9D554 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC14.9□□□□□ -0.02
Sf3a3Q9D554 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Sf3a3Q9D554 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Sf3a3Q9D554 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sf3a3Q9D554 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
Sf3a3Q9D554 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sf3a3Q9D554 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sf3a3Q9D554 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Sf3a3Q9D554 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Sf3a3Q9D554 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sf3a3Q9D554 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sf3a3Q9D554 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Sf3a3Q9D554 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sf3a3Q9D554 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sf3a3Q9D554 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC14.89□□□□□ -0.03
Sf3a3Q9D554 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sf3a3Q9D554 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Sf3a3Q9D554 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sf3a3Q9D554 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sf3a3Q9D554 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Sf3a3Q9D554 Gm11355-201ENSMUST00000121120 306 ntBASIC14.89□□□□□ -0.03
Sf3a3Q9D554 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
Sf3a3Q9D554 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sf3a3Q9D554 Gm25406-201ENSMUST00000157599 105 ntBASIC14.89□□□□□ -0.03
Sf3a3Q9D554 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC14.89□□□□□ -0.03
Sf3a3Q9D554 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Sf3a3Q9D554 AC117588.1-201ENSMUST00000228510 999 ntBASIC14.89□□□□□ -0.03
Sf3a3Q9D554 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC14.89□□□□□ -0.03
Sf3a3Q9D554 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Sf3a3Q9D554 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sf3a3Q9D554 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Sf3a3Q9D554 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms