Protein–RNA interactions for Protein: Q9D2N9

Vps33a, Vacuolar protein sorting-associated protein 33A, mousemouse

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps33aQ9D2N9 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Vps33aQ9D2N9 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Vps33aQ9D2N9 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC15.58■□□□□ 0.08
Vps33aQ9D2N9 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC15.58■□□□□ 0.08
Vps33aQ9D2N9 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Vps33aQ9D2N9 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Vps33aQ9D2N9 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
Vps33aQ9D2N9 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Vps33aQ9D2N9 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Vps33aQ9D2N9 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Vps33aQ9D2N9 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Vps33aQ9D2N9 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC15.57■□□□□ 0.08
Vps33aQ9D2N9 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Vps33aQ9D2N9 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Vps33aQ9D2N9 AC155729.1-201ENSMUST00000227758 544 ntBASIC15.57■□□□□ 0.08
Vps33aQ9D2N9 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Vps33aQ9D2N9 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Vps33aQ9D2N9 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Vps33aQ9D2N9 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
Vps33aQ9D2N9 Gm42748-201ENSMUST00000199354 2341 ntBASIC15.57■□□□□ 0.08
Vps33aQ9D2N9 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
Vps33aQ9D2N9 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Vps33aQ9D2N9 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Vps33aQ9D2N9 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Vps33aQ9D2N9 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Vps33aQ9D2N9 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
Vps33aQ9D2N9 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Vps33aQ9D2N9 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC15.57■□□□□ 0.08
Vps33aQ9D2N9 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Vps33aQ9D2N9 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Vps33aQ9D2N9 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Vps33aQ9D2N9 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Vps33aQ9D2N9 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Vps33aQ9D2N9 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Vps33aQ9D2N9 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Vps33aQ9D2N9 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC15.56■□□□□ 0.08
Vps33aQ9D2N9 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vps33aQ9D2N9 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Vps33aQ9D2N9 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Vps33aQ9D2N9 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Vps33aQ9D2N9 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vps33aQ9D2N9 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Vps33aQ9D2N9 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Vps33aQ9D2N9 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Vps33aQ9D2N9 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC15.56■□□□□ 0.08
Vps33aQ9D2N9 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vps33aQ9D2N9 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vps33aQ9D2N9 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Vps33aQ9D2N9 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Vps33aQ9D2N9 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vps33aQ9D2N9 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC15.56■□□□□ 0.08
Vps33aQ9D2N9 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vps33aQ9D2N9 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Vps33aQ9D2N9 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vps33aQ9D2N9 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vps33aQ9D2N9 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Vps33aQ9D2N9 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vps33aQ9D2N9 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vps33aQ9D2N9 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vps33aQ9D2N9 Gm29361-201ENSMUST00000183323 2000 ntBASIC15.55■□□□□ 0.08
Vps33aQ9D2N9 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Vps33aQ9D2N9 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
Vps33aQ9D2N9 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC15.55■□□□□ 0.08
Vps33aQ9D2N9 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vps33aQ9D2N9 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Vps33aQ9D2N9 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vps33aQ9D2N9 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
Vps33aQ9D2N9 Gm1818-201ENSMUST00000169406 1184 ntBASIC15.55■□□□□ 0.08
Vps33aQ9D2N9 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC15.55■□□□□ 0.08
Vps33aQ9D2N9 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Vps33aQ9D2N9 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Vps33aQ9D2N9 Gm18101-201ENSMUST00000215769 548 ntBASIC15.55■□□□□ 0.08
Vps33aQ9D2N9 Acot6-202ENSMUST00000222921 3622 ntBASIC15.55■□□□□ 0.08
Vps33aQ9D2N9 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC15.55■□□□□ 0.08
Vps33aQ9D2N9 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vps33aQ9D2N9 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vps33aQ9D2N9 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
Vps33aQ9D2N9 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vps33aQ9D2N9 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Vps33aQ9D2N9 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Vps33aQ9D2N9 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vps33aQ9D2N9 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
Vps33aQ9D2N9 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
Vps33aQ9D2N9 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vps33aQ9D2N9 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vps33aQ9D2N9 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vps33aQ9D2N9 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC15.55■□□□□ 0.08
Vps33aQ9D2N9 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Vps33aQ9D2N9 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Vps33aQ9D2N9 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vps33aQ9D2N9 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vps33aQ9D2N9 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC15.54■□□□□ 0.08
Vps33aQ9D2N9 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vps33aQ9D2N9 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vps33aQ9D2N9 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC15.54■□□□□ 0.08
Vps33aQ9D2N9 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vps33aQ9D2N9 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Vps33aQ9D2N9 Gm8318-201ENSMUST00000182954 872 ntBASIC15.54■□□□□ 0.08
Vps33aQ9D2N9 Gm7889-201ENSMUST00000185591 958 ntBASIC15.54■□□□□ 0.08
Vps33aQ9D2N9 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC15.54■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms