Protein–RNA interactions for Protein: Q9CXK8

Nip7, 60S ribosome subunit biogenesis protein NIP7 homolog, mousemouse

Known RBP Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nip7Q9CXK8 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Nip7Q9CXK8 Gm9115-201ENSMUST00000120192 1348 ntBASIC18.22■□□□□ 0.51
Nip7Q9CXK8 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Nip7Q9CXK8 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nip7Q9CXK8 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nip7Q9CXK8 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nip7Q9CXK8 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nip7Q9CXK8 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nip7Q9CXK8 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Nip7Q9CXK8 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Nip7Q9CXK8 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nip7Q9CXK8 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nip7Q9CXK8 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Nip7Q9CXK8 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
Nip7Q9CXK8 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Nip7Q9CXK8 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nip7Q9CXK8 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Nip7Q9CXK8 Gm11478-201ENSMUST00000117851 599 ntBASIC18.21■□□□□ 0.51
Nip7Q9CXK8 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
Nip7Q9CXK8 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC18.21■□□□□ 0.51
Nip7Q9CXK8 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Nip7Q9CXK8 AA619741-201ENSMUST00000195095 646 ntBASIC18.21■□□□□ 0.51
Nip7Q9CXK8 Gm30437-201ENSMUST00000206086 1201 ntBASIC18.21■□□□□ 0.51
Nip7Q9CXK8 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Nip7Q9CXK8 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Nip7Q9CXK8 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nip7Q9CXK8 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Nip7Q9CXK8 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nip7Q9CXK8 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nip7Q9CXK8 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC18.21■□□□□ 0.51
Nip7Q9CXK8 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nip7Q9CXK8 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC18.21■□□□□ 0.51
Nip7Q9CXK8 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nip7Q9CXK8 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Nip7Q9CXK8 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nip7Q9CXK8 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Nip7Q9CXK8 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC18.21■□□□□ 0.51
Nip7Q9CXK8 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nip7Q9CXK8 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nip7Q9CXK8 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nip7Q9CXK8 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Nip7Q9CXK8 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC18.2■□□□□ 0.5
Nip7Q9CXK8 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Nip7Q9CXK8 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Nip7Q9CXK8 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC18.2■□□□□ 0.5
Nip7Q9CXK8 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC18.2■□□□□ 0.5
Nip7Q9CXK8 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Nip7Q9CXK8 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Nip7Q9CXK8 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC18.2■□□□□ 0.5
Nip7Q9CXK8 Gm31326-201ENSMUST00000191856 1048 ntBASIC18.2■□□□□ 0.5
Nip7Q9CXK8 Gm6916-202ENSMUST00000205523 195 ntBASIC18.2■□□□□ 0.5
Nip7Q9CXK8 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Nip7Q9CXK8 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nip7Q9CXK8 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nip7Q9CXK8 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nip7Q9CXK8 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nip7Q9CXK8 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nip7Q9CXK8 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nip7Q9CXK8 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Nip7Q9CXK8 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Nip7Q9CXK8 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nip7Q9CXK8 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC18.19■□□□□ 0.5
Nip7Q9CXK8 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nip7Q9CXK8 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
Nip7Q9CXK8 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nip7Q9CXK8 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nip7Q9CXK8 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Nip7Q9CXK8 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Nip7Q9CXK8 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nip7Q9CXK8 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC18.19■□□□□ 0.5
Nip7Q9CXK8 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nip7Q9CXK8 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nip7Q9CXK8 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Nip7Q9CXK8 Ptprs-211ENSMUST00000223859 5588 ntBASIC18.19■□□□□ 0.5
Nip7Q9CXK8 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Nip7Q9CXK8 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Nip7Q9CXK8 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Nip7Q9CXK8 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nip7Q9CXK8 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nip7Q9CXK8 Gm43548-201ENSMUST00000197139 2353 ntBASIC18.19■□□□□ 0.5
Nip7Q9CXK8 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nip7Q9CXK8 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nip7Q9CXK8 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC18.19■□□□□ 0.5
Nip7Q9CXK8 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nip7Q9CXK8 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nip7Q9CXK8 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nip7Q9CXK8 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Nip7Q9CXK8 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nip7Q9CXK8 BC001981-202ENSMUST00000191393 1545 ntBASIC18.18■□□□□ 0.5
Nip7Q9CXK8 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
Nip7Q9CXK8 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC18.18■□□□□ 0.5
Nip7Q9CXK8 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nip7Q9CXK8 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Nip7Q9CXK8 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nip7Q9CXK8 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC18.18■□□□□ 0.5
Nip7Q9CXK8 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nip7Q9CXK8 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nip7Q9CXK8 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC18.18■□□□□ 0.5
Nip7Q9CXK8 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC18.18■□□□□ 0.5
Nip7Q9CXK8 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms