Protein–RNA interactions for Protein: Q9CWX9

Ddx47, Probable ATP-dependent RNA helicase DDX47, mousemouse

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx47Q9CWX9 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ddx47Q9CWX9 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ddx47Q9CWX9 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Ddx47Q9CWX9 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ddx47Q9CWX9 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ddx47Q9CWX9 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ddx47Q9CWX9 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ddx47Q9CWX9 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ddx47Q9CWX9 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ddx47Q9CWX9 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ddx47Q9CWX9 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ddx47Q9CWX9 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ddx47Q9CWX9 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ddx47Q9CWX9 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
Ddx47Q9CWX9 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ddx47Q9CWX9 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ddx47Q9CWX9 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ddx47Q9CWX9 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ddx47Q9CWX9 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ddx47Q9CWX9 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
Ddx47Q9CWX9 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ddx47Q9CWX9 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC15.13■□□□□ 0.01
Ddx47Q9CWX9 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ddx47Q9CWX9 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ddx47Q9CWX9 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ddx47Q9CWX9 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC15.13■□□□□ 0.01
Ddx47Q9CWX9 Gm43570-201ENSMUST00000199951 3688 ntBASIC15.13■□□□□ 0.01
Ddx47Q9CWX9 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ddx47Q9CWX9 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ddx47Q9CWX9 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ddx47Q9CWX9 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ddx47Q9CWX9 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ddx47Q9CWX9 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ddx47Q9CWX9 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ddx47Q9CWX9 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ddx47Q9CWX9 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ddx47Q9CWX9 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ddx47Q9CWX9 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ddx47Q9CWX9 Gm42872-201ENSMUST00000200026 1967 ntBASIC15.13■□□□□ 0.01
Ddx47Q9CWX9 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ddx47Q9CWX9 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Ddx47Q9CWX9 Gm14451-201ENSMUST00000121581 1542 ntBASIC15.12■□□□□ 0.01
Ddx47Q9CWX9 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ddx47Q9CWX9 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Ddx47Q9CWX9 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ddx47Q9CWX9 Mmp14-206ENSMUST00000225641 3238 ntBASIC15.12■□□□□ 0.01
Ddx47Q9CWX9 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ddx47Q9CWX9 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ddx47Q9CWX9 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ddx47Q9CWX9 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Ddx47Q9CWX9 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Ddx47Q9CWX9 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ddx47Q9CWX9 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
Ddx47Q9CWX9 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Ddx47Q9CWX9 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC15.12■□□□□ 0.01
Ddx47Q9CWX9 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC15.12■□□□□ 0.01
Ddx47Q9CWX9 Ighv6-1-201ENSMUST00000193612 343 ntBASIC15.12■□□□□ 0.01
Ddx47Q9CWX9 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC15.12■□□□□ 0.01
Ddx47Q9CWX9 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ddx47Q9CWX9 AC164567.1-201ENSMUST00000219185 960 ntBASIC15.12■□□□□ 0.01
Ddx47Q9CWX9 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ddx47Q9CWX9 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC15.12■□□□□ 0.01
Ddx47Q9CWX9 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ddx47Q9CWX9 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ddx47Q9CWX9 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ddx47Q9CWX9 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ddx47Q9CWX9 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ddx47Q9CWX9 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC15.12■□□□□ 0.01
Ddx47Q9CWX9 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ddx47Q9CWX9 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ddx47Q9CWX9 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC15.12■□□□□ 0.01
Ddx47Q9CWX9 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ddx47Q9CWX9 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ddx47Q9CWX9 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ddx47Q9CWX9 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Ddx47Q9CWX9 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC15.11■□□□□ 0.01
Ddx47Q9CWX9 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ddx47Q9CWX9 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ddx47Q9CWX9 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ddx47Q9CWX9 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ddx47Q9CWX9 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ddx47Q9CWX9 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC15.11■□□□□ 0.01
Ddx47Q9CWX9 CT025610.1-201ENSMUST00000224552 1786 ntBASIC15.11■□□□□ 0.01
Ddx47Q9CWX9 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ddx47Q9CWX9 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ddx47Q9CWX9 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ddx47Q9CWX9 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC15.11■□□□□ 0.01
Ddx47Q9CWX9 Gm12497-201ENSMUST00000138778 237 ntBASIC15.11■□□□□ 0.01
Ddx47Q9CWX9 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC15.11■□□□□ 0.01
Ddx47Q9CWX9 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ddx47Q9CWX9 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Ddx47Q9CWX9 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ddx47Q9CWX9 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ddx47Q9CWX9 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Ddx47Q9CWX9 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ddx47Q9CWX9 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Ddx47Q9CWX9 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ddx47Q9CWX9 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
Ddx47Q9CWX9 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC15.11■□□□□ 0.01
Ddx47Q9CWX9 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms