Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
H2afb1Q9CQ70 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC12.04□□□□□ -0.48
H2afb1Q9CQ70 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
H2afb1Q9CQ70 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
H2afb1Q9CQ70 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
H2afb1Q9CQ70 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
H2afb1Q9CQ70 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
H2afb1Q9CQ70 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
H2afb1Q9CQ70 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
H2afb1Q9CQ70 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
H2afb1Q9CQ70 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
H2afb1Q9CQ70 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
H2afb1Q9CQ70 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
H2afb1Q9CQ70 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC12.03□□□□□ -0.48
H2afb1Q9CQ70 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
H2afb1Q9CQ70 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC12.03□□□□□ -0.48
H2afb1Q9CQ70 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
H2afb1Q9CQ70 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
H2afb1Q9CQ70 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
H2afb1Q9CQ70 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
H2afb1Q9CQ70 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
H2afb1Q9CQ70 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
H2afb1Q9CQ70 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
H2afb1Q9CQ70 Gm8749-201ENSMUST00000117737 331 ntBASIC12.03□□□□□ -0.48
H2afb1Q9CQ70 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC12.03□□□□□ -0.48
H2afb1Q9CQ70 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
H2afb1Q9CQ70 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
H2afb1Q9CQ70 AC084391.1-201ENSMUST00000200651 141 ntBASIC12.03□□□□□ -0.48
H2afb1Q9CQ70 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC12.03□□□□□ -0.48
H2afb1Q9CQ70 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC12.03□□□□□ -0.48
H2afb1Q9CQ70 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
H2afb1Q9CQ70 Gm10819-201ENSMUST00000099988 561 ntBASIC12.03□□□□□ -0.48
H2afb1Q9CQ70 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
H2afb1Q9CQ70 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
H2afb1Q9CQ70 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
H2afb1Q9CQ70 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
H2afb1Q9CQ70 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
H2afb1Q9CQ70 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
H2afb1Q9CQ70 Gm11873-201ENSMUST00000117877 1304 ntBASIC12.03□□□□□ -0.48
H2afb1Q9CQ70 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
H2afb1Q9CQ70 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
H2afb1Q9CQ70 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
H2afb1Q9CQ70 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
H2afb1Q9CQ70 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
H2afb1Q9CQ70 AC167013.2-201ENSMUST00000228520 2684 ntBASIC12.03□□□□□ -0.48
H2afb1Q9CQ70 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC12.02□□□□□ -0.48
H2afb1Q9CQ70 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
H2afb1Q9CQ70 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
H2afb1Q9CQ70 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
H2afb1Q9CQ70 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC12.02□□□□□ -0.48
H2afb1Q9CQ70 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.48
H2afb1Q9CQ70 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.48
H2afb1Q9CQ70 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
H2afb1Q9CQ70 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
H2afb1Q9CQ70 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
H2afb1Q9CQ70 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
H2afb1Q9CQ70 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
H2afb1Q9CQ70 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC12.02□□□□□ -0.48
H2afb1Q9CQ70 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
H2afb1Q9CQ70 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
H2afb1Q9CQ70 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
H2afb1Q9CQ70 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
H2afb1Q9CQ70 AC131743.5-201ENSMUST00000220775 1618 ntBASIC12.02□□□□□ -0.49
H2afb1Q9CQ70 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
H2afb1Q9CQ70 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
H2afb1Q9CQ70 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC12.02□□□□□ -0.49
H2afb1Q9CQ70 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC12.02□□□□□ -0.49
H2afb1Q9CQ70 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
H2afb1Q9CQ70 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
H2afb1Q9CQ70 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
H2afb1Q9CQ70 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC12.02□□□□□ -0.49
H2afb1Q9CQ70 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
H2afb1Q9CQ70 Gm9726-201ENSMUST00000180321 678 ntBASIC12.02□□□□□ -0.49
H2afb1Q9CQ70 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
H2afb1Q9CQ70 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
H2afb1Q9CQ70 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
H2afb1Q9CQ70 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
H2afb1Q9CQ70 Gm15590-201ENSMUST00000078419 552 ntBASIC12.02□□□□□ -0.49
H2afb1Q9CQ70 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC12.02□□□□□ -0.49
H2afb1Q9CQ70 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
H2afb1Q9CQ70 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
H2afb1Q9CQ70 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
H2afb1Q9CQ70 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
H2afb1Q9CQ70 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
H2afb1Q9CQ70 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC12.02□□□□□ -0.49
H2afb1Q9CQ70 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
H2afb1Q9CQ70 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
H2afb1Q9CQ70 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
H2afb1Q9CQ70 Gm37912-201ENSMUST00000191895 3076 ntBASIC12.02□□□□□ -0.49
H2afb1Q9CQ70 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
H2afb1Q9CQ70 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
H2afb1Q9CQ70 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
H2afb1Q9CQ70 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
H2afb1Q9CQ70 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
H2afb1Q9CQ70 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
H2afb1Q9CQ70 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC12.01□□□□□ -0.49
H2afb1Q9CQ70 Gm43205-201ENSMUST00000198622 1968 ntBASIC12.01□□□□□ -0.49
H2afb1Q9CQ70 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
H2afb1Q9CQ70 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
H2afb1Q9CQ70 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms