Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim8Q99PJ2 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim8Q99PJ2 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC14.42□□□□□ -0.1
Trim8Q99PJ2 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim8Q99PJ2 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.42□□□□□ -0.1
Trim8Q99PJ2 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trim8Q99PJ2 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trim8Q99PJ2 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim8Q99PJ2 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC14.42□□□□□ -0.1
Trim8Q99PJ2 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim8Q99PJ2 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Trim8Q99PJ2 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.42□□□□□ -0.1
Trim8Q99PJ2 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trim8Q99PJ2 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim8Q99PJ2 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC14.41□□□□□ -0.1
Trim8Q99PJ2 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim8Q99PJ2 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim8Q99PJ2 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trim8Q99PJ2 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim8Q99PJ2 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trim8Q99PJ2 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC14.41□□□□□ -0.1
Trim8Q99PJ2 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim8Q99PJ2 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC14.41□□□□□ -0.1
Trim8Q99PJ2 Gm44357-201ENSMUST00000195897 142 ntBASIC14.41□□□□□ -0.1
Trim8Q99PJ2 Gm19658-201ENSMUST00000196231 138 ntBASIC14.41□□□□□ -0.1
Trim8Q99PJ2 Gm44367-201ENSMUST00000196836 138 ntBASIC14.41□□□□□ -0.1
Trim8Q99PJ2 Gm44350-201ENSMUST00000197197 138 ntBASIC14.41□□□□□ -0.1
Trim8Q99PJ2 Gm44390-201ENSMUST00000197533 144 ntBASIC14.41□□□□□ -0.1
Trim8Q99PJ2 Gm44313-201ENSMUST00000198018 138 ntBASIC14.41□□□□□ -0.1
Trim8Q99PJ2 Gm44486-201ENSMUST00000198508 138 ntBASIC14.41□□□□□ -0.1
Trim8Q99PJ2 Gm44314-201ENSMUST00000199263 138 ntBASIC14.41□□□□□ -0.1
Trim8Q99PJ2 Gm44394-201ENSMUST00000199558 138 ntBASIC14.41□□□□□ -0.1
Trim8Q99PJ2 Gm44484-201ENSMUST00000199873 138 ntBASIC14.41□□□□□ -0.1
Trim8Q99PJ2 Gm44466-201ENSMUST00000200264 138 ntBASIC14.41□□□□□ -0.1
Trim8Q99PJ2 Gm44359-201ENSMUST00000200671 138 ntBASIC14.41□□□□□ -0.1
Trim8Q99PJ2 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim8Q99PJ2 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC14.41□□□□□ -0.1
Trim8Q99PJ2 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Trim8Q99PJ2 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC14.41□□□□□ -0.1
Trim8Q99PJ2 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim8Q99PJ2 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim8Q99PJ2 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Trim8Q99PJ2 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim8Q99PJ2 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim8Q99PJ2 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trim8Q99PJ2 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim8Q99PJ2 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim8Q99PJ2 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim8Q99PJ2 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim8Q99PJ2 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim8Q99PJ2 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim8Q99PJ2 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trim8Q99PJ2 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Trim8Q99PJ2 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trim8Q99PJ2 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim8Q99PJ2 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trim8Q99PJ2 Gm13418-201ENSMUST00000119097 944 ntBASIC14.4□□□□□ -0.1
Trim8Q99PJ2 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim8Q99PJ2 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trim8Q99PJ2 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC14.4□□□□□ -0.1
Trim8Q99PJ2 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC14.4□□□□□ -0.1
Trim8Q99PJ2 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim8Q99PJ2 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim8Q99PJ2 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim8Q99PJ2 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trim8Q99PJ2 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC14.4□□□□□ -0.1
Trim8Q99PJ2 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Trim8Q99PJ2 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC14.4□□□□□ -0.1
Trim8Q99PJ2 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Trim8Q99PJ2 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
Trim8Q99PJ2 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC14.4□□□□□ -0.1
Trim8Q99PJ2 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Trim8Q99PJ2 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim8Q99PJ2 Gm44645-201ENSMUST00000205492 1653 ntBASIC14.39□□□□□ -0.11
Trim8Q99PJ2 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trim8Q99PJ2 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim8Q99PJ2 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim8Q99PJ2 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Trim8Q99PJ2 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim8Q99PJ2 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Trim8Q99PJ2 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim8Q99PJ2 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
Trim8Q99PJ2 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC14.39□□□□□ -0.11
Trim8Q99PJ2 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim8Q99PJ2 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trim8Q99PJ2 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Trim8Q99PJ2 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Trim8Q99PJ2 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim8Q99PJ2 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim8Q99PJ2 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC14.39□□□□□ -0.11
Trim8Q99PJ2 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC14.39□□□□□ -0.11
Trim8Q99PJ2 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC14.39□□□□□ -0.11
Trim8Q99PJ2 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC14.39□□□□□ -0.11
Trim8Q99PJ2 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC14.39□□□□□ -0.11
Trim8Q99PJ2 Gm34391-201ENSMUST00000203706 907 ntBASIC14.39□□□□□ -0.11
Trim8Q99PJ2 Rbfox2-207ENSMUST00000227533 1041 ntBASIC14.39□□□□□ -0.11
Trim8Q99PJ2 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim8Q99PJ2 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim8Q99PJ2 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
Trim8Q99PJ2 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms