Protein–RNA interactions for Protein: Q99P72

Rtn4, Reticulon-4, mousemouse

Known RBP Predictions only

Length 1,162 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4Q99P72 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rtn4Q99P72 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rtn4Q99P72 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rtn4Q99P72 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Rtn4Q99P72 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rtn4Q99P72 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rtn4Q99P72 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rtn4Q99P72 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rtn4Q99P72 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rtn4Q99P72 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rtn4Q99P72 Gm14435-201ENSMUST00000108995 643 ntAPPRIS P5 TSL 2 BASIC18.9■□□□□ 0.62
Rtn4Q99P72 Gm14659-201ENSMUST00000117667 843 ntBASIC18.9■□□□□ 0.62
Rtn4Q99P72 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC18.9■□□□□ 0.62
Rtn4Q99P72 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rtn4Q99P72 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rtn4Q99P72 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rtn4Q99P72 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rtn4Q99P72 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Rtn4Q99P72 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rtn4Q99P72 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rtn4Q99P72 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rtn4Q99P72 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rtn4Q99P72 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rtn4Q99P72 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rtn4Q99P72 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC18.9■□□□□ 0.62
Rtn4Q99P72 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rtn4Q99P72 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Rtn4Q99P72 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rtn4Q99P72 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rtn4Q99P72 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rtn4Q99P72 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC18.9■□□□□ 0.62
Rtn4Q99P72 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Rtn4Q99P72 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Rtn4Q99P72 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rtn4Q99P72 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rtn4Q99P72 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rtn4Q99P72 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rtn4Q99P72 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rtn4Q99P72 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rtn4Q99P72 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Rtn4Q99P72 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rtn4Q99P72 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Rtn4Q99P72 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC18.89■□□□□ 0.61
Rtn4Q99P72 Csn3-201ENSMUST00000001667 991 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rtn4Q99P72 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rtn4Q99P72 Gm38018-201ENSMUST00000195651 540 ntBASIC18.89■□□□□ 0.61
Rtn4Q99P72 Gm2861-201ENSMUST00000199885 666 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Rtn4Q99P72 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rtn4Q99P72 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rtn4Q99P72 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rtn4Q99P72 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rtn4Q99P72 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Rtn4Q99P72 AC119177.1-201ENSMUST00000227647 1332 ntBASIC18.89■□□□□ 0.61
Rtn4Q99P72 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rtn4Q99P72 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rtn4Q99P72 Olfr282-203ENSMUST00000213608 1374 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Rtn4Q99P72 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC18.89■□□□□ 0.61
Rtn4Q99P72 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rtn4Q99P72 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rtn4Q99P72 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
Rtn4Q99P72 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rtn4Q99P72 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Rtn4Q99P72 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rtn4Q99P72 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC18.88■□□□□ 0.61
Rtn4Q99P72 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rtn4Q99P72 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rtn4Q99P72 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rtn4Q99P72 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Rtn4Q99P72 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rtn4Q99P72 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rtn4Q99P72 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rtn4Q99P72 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC18.88■□□□□ 0.61
Rtn4Q99P72 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rtn4Q99P72 Gm16420-201ENSMUST00000120258 856 ntBASIC18.88■□□□□ 0.61
Rtn4Q99P72 Gm27301-201ENSMUST00000184012 127 ntBASIC18.88■□□□□ 0.61
Rtn4Q99P72 Gm27494-201ENSMUST00000184735 189 ntBASIC18.88■□□□□ 0.61
Rtn4Q99P72 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC18.88■□□□□ 0.61
Rtn4Q99P72 Thap2-203ENSMUST00000218989 527 ntBASIC18.88■□□□□ 0.61
Rtn4Q99P72 Gm19540-201ENSMUST00000221843 810 ntBASIC18.88■□□□□ 0.61
Rtn4Q99P72 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rtn4Q99P72 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
Rtn4Q99P72 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rtn4Q99P72 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rtn4Q99P72 Gm43072-201ENSMUST00000200283 1671 ntBASIC18.88■□□□□ 0.61
Rtn4Q99P72 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rtn4Q99P72 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rtn4Q99P72 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Rtn4Q99P72 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rtn4Q99P72 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rtn4Q99P72 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rtn4Q99P72 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rtn4Q99P72 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Rtn4Q99P72 Gm21451-201ENSMUST00000111062 2775 ntBASIC18.87■□□□□ 0.61
Rtn4Q99P72 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Rtn4Q99P72 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rtn4Q99P72 Gm15427-201ENSMUST00000117288 531 ntBASIC18.87■□□□□ 0.61
Rtn4Q99P72 Gm13365-201ENSMUST00000121188 973 ntBASIC18.87■□□□□ 0.61
Rtn4Q99P72 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC18.87■□□□□ 0.61
Rtn4Q99P72 Gm12752-201ENSMUST00000121657 811 ntBASIC18.87■□□□□ 0.61
Rtn4Q99P72 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms