Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Msh4Q99MT2 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC14.33□□□□□ -0.12
Msh4Q99MT2 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Msh4Q99MT2 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Msh4Q99MT2 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Msh4Q99MT2 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Msh4Q99MT2 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Msh4Q99MT2 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Msh4Q99MT2 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Msh4Q99MT2 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Msh4Q99MT2 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Msh4Q99MT2 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Msh4Q99MT2 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Msh4Q99MT2 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Msh4Q99MT2 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Msh4Q99MT2 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Msh4Q99MT2 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Msh4Q99MT2 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Msh4Q99MT2 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Msh4Q99MT2 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Msh4Q99MT2 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.32□□□□□ -0.12
Msh4Q99MT2 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Msh4Q99MT2 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Msh4Q99MT2 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC14.32□□□□□ -0.12
Msh4Q99MT2 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.32□□□□□ -0.12
Msh4Q99MT2 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Msh4Q99MT2 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Msh4Q99MT2 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC14.32□□□□□ -0.12
Msh4Q99MT2 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC14.32□□□□□ -0.12
Msh4Q99MT2 Gm4913-201ENSMUST00000117075 1290 ntBASIC14.32□□□□□ -0.12
Msh4Q99MT2 H2af-ps-201ENSMUST00000119066 295 ntBASIC14.32□□□□□ -0.12
Msh4Q99MT2 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC14.32□□□□□ -0.12
Msh4Q99MT2 Gm14822-201ENSMUST00000122247 291 ntBASIC14.32□□□□□ -0.12
Msh4Q99MT2 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Msh4Q99MT2 Gm17271-201ENSMUST00000165535 355 ntBASIC14.32□□□□□ -0.12
Msh4Q99MT2 Gm24513-201ENSMUST00000174964 138 ntBASIC14.32□□□□□ -0.12
Msh4Q99MT2 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Msh4Q99MT2 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC14.32□□□□□ -0.12
Msh4Q99MT2 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Msh4Q99MT2 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Msh4Q99MT2 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Msh4Q99MT2 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Msh4Q99MT2 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Msh4Q99MT2 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Msh4Q99MT2 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Msh4Q99MT2 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Msh4Q99MT2 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC14.32□□□□□ -0.12
Msh4Q99MT2 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Msh4Q99MT2 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC14.32□□□□□ -0.12
Msh4Q99MT2 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Msh4Q99MT2 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Msh4Q99MT2 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Msh4Q99MT2 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Msh4Q99MT2 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Msh4Q99MT2 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Msh4Q99MT2 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Msh4Q99MT2 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Msh4Q99MT2 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Msh4Q99MT2 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Msh4Q99MT2 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Msh4Q99MT2 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Msh4Q99MT2 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Msh4Q99MT2 Gm43697-201ENSMUST00000199637 2581 ntBASIC14.31□□□□□ -0.12
Msh4Q99MT2 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Msh4Q99MT2 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Msh4Q99MT2 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Msh4Q99MT2 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Msh4Q99MT2 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Msh4Q99MT2 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Msh4Q99MT2 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Msh4Q99MT2 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Msh4Q99MT2 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Msh4Q99MT2 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Msh4Q99MT2 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Msh4Q99MT2 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC14.31□□□□□ -0.12
Msh4Q99MT2 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Msh4Q99MT2 Gm5177-201ENSMUST00000183092 997 ntBASIC14.31□□□□□ -0.12
Msh4Q99MT2 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC14.31□□□□□ -0.12
Msh4Q99MT2 Gm2756-201ENSMUST00000195851 400 ntBASIC14.31□□□□□ -0.12
Msh4Q99MT2 Gm44492-201ENSMUST00000197012 141 ntBASIC14.31□□□□□ -0.12
Msh4Q99MT2 Ndufaf2-202ENSMUST00000223734 556 ntBASIC14.31□□□□□ -0.12
Msh4Q99MT2 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Msh4Q99MT2 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Msh4Q99MT2 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC14.31□□□□□ -0.12
Msh4Q99MT2 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Msh4Q99MT2 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Msh4Q99MT2 Gm43509-201ENSMUST00000196551 2594 ntBASIC14.31□□□□□ -0.12
Msh4Q99MT2 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Msh4Q99MT2 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Msh4Q99MT2 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Msh4Q99MT2 Gm37297-201ENSMUST00000192974 2384 ntBASIC14.31□□□□□ -0.12
Msh4Q99MT2 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Msh4Q99MT2 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
Msh4Q99MT2 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Msh4Q99MT2 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC14.3□□□□□ -0.12
Msh4Q99MT2 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC14.3□□□□□ -0.12
Msh4Q99MT2 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Msh4Q99MT2 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Msh4Q99MT2 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Msh4Q99MT2 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms