Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Chmp1b1Q99LU0 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Chmp1b1Q99LU0 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Chmp1b1Q99LU0 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Chmp1b1Q99LU0 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Chmp1b1Q99LU0 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Chmp1b1Q99LU0 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Chmp1b1Q99LU0 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Chmp1b1Q99LU0 Gm1401-201ENSMUST00000122048 772 ntBASIC13.91□□□□□ -0.18
Chmp1b1Q99LU0 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Chmp1b1Q99LU0 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC13.91□□□□□ -0.18
Chmp1b1Q99LU0 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Chmp1b1Q99LU0 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC13.91□□□□□ -0.18
Chmp1b1Q99LU0 Gm42670-201ENSMUST00000201816 1292 ntBASIC13.91□□□□□ -0.18
Chmp1b1Q99LU0 Gm18246-201ENSMUST00000221023 728 ntBASIC13.91□□□□□ -0.18
Chmp1b1Q99LU0 AC131709.1-201ENSMUST00000224731 1180 ntBASIC13.91□□□□□ -0.18
Chmp1b1Q99LU0 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Chmp1b1Q99LU0 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Chmp1b1Q99LU0 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Chmp1b1Q99LU0 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Chmp1b1Q99LU0 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC13.91□□□□□ -0.18
Chmp1b1Q99LU0 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Chmp1b1Q99LU0 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Chmp1b1Q99LU0 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Chmp1b1Q99LU0 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Chmp1b1Q99LU0 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Chmp1b1Q99LU0 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Chmp1b1Q99LU0 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Chmp1b1Q99LU0 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Chmp1b1Q99LU0 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Chmp1b1Q99LU0 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Chmp1b1Q99LU0 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Chmp1b1Q99LU0 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Chmp1b1Q99LU0 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Chmp1b1Q99LU0 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Chmp1b1Q99LU0 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Chmp1b1Q99LU0 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Chmp1b1Q99LU0 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC13.9□□□□□ -0.18
Chmp1b1Q99LU0 Gm27628-201ENSMUST00000184911 107 ntBASIC13.9□□□□□ -0.18
Chmp1b1Q99LU0 Gm43935-201ENSMUST00000203569 1050 ntBASIC13.9□□□□□ -0.18
Chmp1b1Q99LU0 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC13.9□□□□□ -0.18
Chmp1b1Q99LU0 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Chmp1b1Q99LU0 AC147366.1-201ENSMUST00000227671 852 ntBASIC13.9□□□□□ -0.18
Chmp1b1Q99LU0 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Chmp1b1Q99LU0 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Chmp1b1Q99LU0 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Chmp1b1Q99LU0 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Chmp1b1Q99LU0 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Chmp1b1Q99LU0 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Chmp1b1Q99LU0 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Chmp1b1Q99LU0 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Chmp1b1Q99LU0 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Chmp1b1Q99LU0 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Chmp1b1Q99LU0 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Chmp1b1Q99LU0 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Chmp1b1Q99LU0 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
Chmp1b1Q99LU0 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Chmp1b1Q99LU0 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Chmp1b1Q99LU0 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC13.89□□□□□ -0.19
Chmp1b1Q99LU0 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Chmp1b1Q99LU0 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC13.89□□□□□ -0.19
Chmp1b1Q99LU0 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC13.89□□□□□ -0.19
Chmp1b1Q99LU0 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC13.89□□□□□ -0.19
Chmp1b1Q99LU0 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC13.89□□□□□ -0.19
Chmp1b1Q99LU0 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Chmp1b1Q99LU0 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC13.89□□□□□ -0.19
Chmp1b1Q99LU0 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Chmp1b1Q99LU0 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Chmp1b1Q99LU0 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC13.89□□□□□ -0.19
Chmp1b1Q99LU0 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Chmp1b1Q99LU0 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Chmp1b1Q99LU0 Gm44291-201ENSMUST00000203102 2865 ntBASIC13.89□□□□□ -0.19
Chmp1b1Q99LU0 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Chmp1b1Q99LU0 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Chmp1b1Q99LU0 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Chmp1b1Q99LU0 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Chmp1b1Q99LU0 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Chmp1b1Q99LU0 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Chmp1b1Q99LU0 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC13.89□□□□□ -0.19
Chmp1b1Q99LU0 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Chmp1b1Q99LU0 Gm38318-201ENSMUST00000195769 1706 ntBASIC13.89□□□□□ -0.19
Chmp1b1Q99LU0 Celf4-206ENSMUST00000224553 1729 ntBASIC13.89□□□□□ -0.19
Chmp1b1Q99LU0 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Chmp1b1Q99LU0 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Chmp1b1Q99LU0 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Chmp1b1Q99LU0 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Chmp1b1Q99LU0 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Chmp1b1Q99LU0 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Chmp1b1Q99LU0 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Chmp1b1Q99LU0 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Chmp1b1Q99LU0 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC13.88□□□□□ -0.19
Chmp1b1Q99LU0 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Chmp1b1Q99LU0 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Chmp1b1Q99LU0 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Chmp1b1Q99LU0 Gm29361-201ENSMUST00000183323 2000 ntBASIC13.88□□□□□ -0.19
Chmp1b1Q99LU0 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Chmp1b1Q99LU0 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Chmp1b1Q99LU0 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Chmp1b1Q99LU0 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Chmp1b1Q99LU0 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms