Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Clp1Q99LI9 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Clp1Q99LI9 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Clp1Q99LI9 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Clp1Q99LI9 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Clp1Q99LI9 Gm12960-201ENSMUST00000120017 1066 ntBASIC15.42■□□□□ 0.06
Clp1Q99LI9 Gm15393-201ENSMUST00000120499 219 ntBASIC15.42■□□□□ 0.06
Clp1Q99LI9 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Clp1Q99LI9 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC15.42■□□□□ 0.06
Clp1Q99LI9 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC15.42■□□□□ 0.06
Clp1Q99LI9 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Clp1Q99LI9 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Clp1Q99LI9 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC15.42■□□□□ 0.06
Clp1Q99LI9 Gm33320-201ENSMUST00000192232 530 ntBASIC15.42■□□□□ 0.06
Clp1Q99LI9 AC162801.1-201ENSMUST00000220612 198 ntBASIC15.42■□□□□ 0.06
Clp1Q99LI9 AC154846.1-201ENSMUST00000226278 862 ntBASIC15.42■□□□□ 0.06
Clp1Q99LI9 AC159006.1-201ENSMUST00000226396 258 ntBASIC15.42■□□□□ 0.06
Clp1Q99LI9 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC15.42■□□□□ 0.06
Clp1Q99LI9 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Clp1Q99LI9 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Clp1Q99LI9 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC15.42■□□□□ 0.06
Clp1Q99LI9 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Clp1Q99LI9 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC15.42■□□□□ 0.06
Clp1Q99LI9 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Clp1Q99LI9 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Clp1Q99LI9 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Clp1Q99LI9 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Clp1Q99LI9 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Clp1Q99LI9 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Clp1Q99LI9 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Clp1Q99LI9 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Clp1Q99LI9 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Clp1Q99LI9 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Clp1Q99LI9 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Clp1Q99LI9 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Clp1Q99LI9 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Clp1Q99LI9 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Clp1Q99LI9 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Clp1Q99LI9 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Clp1Q99LI9 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Clp1Q99LI9 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Clp1Q99LI9 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC15.41■□□□□ 0.06
Clp1Q99LI9 Gm5354-201ENSMUST00000182417 973 ntBASIC15.41■□□□□ 0.06
Clp1Q99LI9 Gm27701-201ENSMUST00000184498 110 ntBASIC15.41■□□□□ 0.06
Clp1Q99LI9 Gm5035-201ENSMUST00000215581 927 ntBASIC15.41■□□□□ 0.06
Clp1Q99LI9 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC15.41■□□□□ 0.06
Clp1Q99LI9 CT030657.3-201ENSMUST00000222707 1200 ntBASIC15.41■□□□□ 0.06
Clp1Q99LI9 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Clp1Q99LI9 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Clp1Q99LI9 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Clp1Q99LI9 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC15.41■□□□□ 0.06
Clp1Q99LI9 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Clp1Q99LI9 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Clp1Q99LI9 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Clp1Q99LI9 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Clp1Q99LI9 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Clp1Q99LI9 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Clp1Q99LI9 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Clp1Q99LI9 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Clp1Q99LI9 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC15.41■□□□□ 0.06
Clp1Q99LI9 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
Clp1Q99LI9 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Clp1Q99LI9 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC15.4■□□□□ 0.06
Clp1Q99LI9 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Clp1Q99LI9 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC15.4■□□□□ 0.06
Clp1Q99LI9 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Clp1Q99LI9 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Clp1Q99LI9 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Clp1Q99LI9 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC15.4■□□□□ 0.06
Clp1Q99LI9 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Clp1Q99LI9 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Clp1Q99LI9 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC15.4■□□□□ 0.06
Clp1Q99LI9 Gm15460-201ENSMUST00000118147 391 ntBASIC15.4■□□□□ 0.06
Clp1Q99LI9 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC15.4■□□□□ 0.06
Clp1Q99LI9 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC15.4■□□□□ 0.06
Clp1Q99LI9 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC15.4■□□□□ 0.06
Clp1Q99LI9 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Clp1Q99LI9 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Clp1Q99LI9 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Clp1Q99LI9 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Clp1Q99LI9 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Clp1Q99LI9 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Clp1Q99LI9 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Clp1Q99LI9 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Clp1Q99LI9 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Clp1Q99LI9 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Clp1Q99LI9 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Clp1Q99LI9 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Clp1Q99LI9 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Clp1Q99LI9 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Clp1Q99LI9 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC15.39■□□□□ 0.05
Clp1Q99LI9 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Clp1Q99LI9 Gm21009-201ENSMUST00000197169 1669 ntBASIC15.39■□□□□ 0.05
Clp1Q99LI9 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Clp1Q99LI9 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Clp1Q99LI9 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Clp1Q99LI9 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Clp1Q99LI9 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Clp1Q99LI9 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Clp1Q99LI9 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC15.39■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms