Protein–RNA interactions for Protein: Q99KU0

Vmp1, Vacuole membrane protein 1, mousemouse

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmp1Q99KU0 Gm9727-201ENSMUST00000161387 555 ntBASIC14.19□□□□□ -0.14
Vmp1Q99KU0 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vmp1Q99KU0 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC14.19□□□□□ -0.14
Vmp1Q99KU0 Gm8000-201ENSMUST00000188378 592 ntBASIC14.19□□□□□ -0.14
Vmp1Q99KU0 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Vmp1Q99KU0 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC14.19□□□□□ -0.14
Vmp1Q99KU0 AC147366.1-201ENSMUST00000227671 852 ntBASIC14.19□□□□□ -0.14
Vmp1Q99KU0 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vmp1Q99KU0 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC14.19□□□□□ -0.14
Vmp1Q99KU0 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Vmp1Q99KU0 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vmp1Q99KU0 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Vmp1Q99KU0 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vmp1Q99KU0 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vmp1Q99KU0 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vmp1Q99KU0 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Vmp1Q99KU0 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vmp1Q99KU0 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vmp1Q99KU0 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vmp1Q99KU0 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vmp1Q99KU0 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Vmp1Q99KU0 AC157650.3-201ENSMUST00000225058 1476 ntBASIC14.18□□□□□ -0.14
Vmp1Q99KU0 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Vmp1Q99KU0 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vmp1Q99KU0 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Vmp1Q99KU0 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Vmp1Q99KU0 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vmp1Q99KU0 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vmp1Q99KU0 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Vmp1Q99KU0 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vmp1Q99KU0 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vmp1Q99KU0 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vmp1Q99KU0 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
Vmp1Q99KU0 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Vmp1Q99KU0 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Vmp1Q99KU0 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vmp1Q99KU0 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vmp1Q99KU0 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC14.18□□□□□ -0.14
Vmp1Q99KU0 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Vmp1Q99KU0 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Vmp1Q99KU0 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vmp1Q99KU0 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Vmp1Q99KU0 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vmp1Q99KU0 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Vmp1Q99KU0 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC14.18□□□□□ -0.14
Vmp1Q99KU0 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vmp1Q99KU0 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Vmp1Q99KU0 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vmp1Q99KU0 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vmp1Q99KU0 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vmp1Q99KU0 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Vmp1Q99KU0 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Vmp1Q99KU0 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vmp1Q99KU0 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vmp1Q99KU0 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vmp1Q99KU0 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC14.18□□□□□ -0.14
Vmp1Q99KU0 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vmp1Q99KU0 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC14.18□□□□□ -0.14
Vmp1Q99KU0 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC14.18□□□□□ -0.14
Vmp1Q99KU0 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vmp1Q99KU0 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Vmp1Q99KU0 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vmp1Q99KU0 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Vmp1Q99KU0 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vmp1Q99KU0 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Vmp1Q99KU0 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vmp1Q99KU0 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vmp1Q99KU0 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Vmp1Q99KU0 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vmp1Q99KU0 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vmp1Q99KU0 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vmp1Q99KU0 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vmp1Q99KU0 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vmp1Q99KU0 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vmp1Q99KU0 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC14.17□□□□□ -0.14
Vmp1Q99KU0 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC14.17□□□□□ -0.14
Vmp1Q99KU0 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vmp1Q99KU0 Gm15467-201ENSMUST00000120582 445 ntBASIC14.17□□□□□ -0.14
Vmp1Q99KU0 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC14.17□□□□□ -0.14
Vmp1Q99KU0 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vmp1Q99KU0 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Vmp1Q99KU0 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC14.17□□□□□ -0.14
Vmp1Q99KU0 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vmp1Q99KU0 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vmp1Q99KU0 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vmp1Q99KU0 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vmp1Q99KU0 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vmp1Q99KU0 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Vmp1Q99KU0 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vmp1Q99KU0 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Vmp1Q99KU0 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vmp1Q99KU0 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vmp1Q99KU0 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vmp1Q99KU0 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vmp1Q99KU0 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vmp1Q99KU0 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
Vmp1Q99KU0 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC14.17□□□□□ -0.14
Vmp1Q99KU0 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vmp1Q99KU0 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Vmp1Q99KU0 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms