Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Gm42934-201ENSMUST00000196920 1345 ntBASIC15.62■□□□□ 0.09
Pcdha9Q91Y11 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdha9Q91Y11 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdha9Q91Y11 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdha9Q91Y11 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdha9Q91Y11 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdha9Q91Y11 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdha9Q91Y11 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdha9Q91Y11 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdha9Q91Y11 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdha9Q91Y11 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC15.61■□□□□ 0.09
Pcdha9Q91Y11 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdha9Q91Y11 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC15.61■□□□□ 0.09
Pcdha9Q91Y11 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC15.61■□□□□ 0.09
Pcdha9Q91Y11 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC15.61■□□□□ 0.09
Pcdha9Q91Y11 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC15.61■□□□□ 0.09
Pcdha9Q91Y11 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdha9Q91Y11 Gm18889-201ENSMUST00000174284 929 ntBASIC15.61■□□□□ 0.09
Pcdha9Q91Y11 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdha9Q91Y11 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Pcdha9Q91Y11 Gm27702-201ENSMUST00000184512 56 ntBASIC15.61■□□□□ 0.09
Pcdha9Q91Y11 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Pcdha9Q91Y11 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdha9Q91Y11 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC15.61■□□□□ 0.09
Pcdha9Q91Y11 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdha9Q91Y11 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdha9Q91Y11 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdha9Q91Y11 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Pcdha9Q91Y11 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Pcdha9Q91Y11 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdha9Q91Y11 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdha9Q91Y11 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdha9Q91Y11 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdha9Q91Y11 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Pcdha9Q91Y11 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdha9Q91Y11 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdha9Q91Y11 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdha9Q91Y11 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Pcdha9Q91Y11 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdha9Q91Y11 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdha9Q91Y11 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdha9Q91Y11 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdha9Q91Y11 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdha9Q91Y11 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdha9Q91Y11 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdha9Q91Y11 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC15.6■□□□□ 0.09
Pcdha9Q91Y11 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC15.6■□□□□ 0.09
Pcdha9Q91Y11 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdha9Q91Y11 AC151286.1-201ENSMUST00000198489 145 ntBASIC15.6■□□□□ 0.09
Pcdha9Q91Y11 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC15.6■□□□□ 0.09
Pcdha9Q91Y11 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Pcdha9Q91Y11 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdha9Q91Y11 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdha9Q91Y11 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Pcdha9Q91Y11 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Pcdha9Q91Y11 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdha9Q91Y11 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdha9Q91Y11 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC15.6■□□□□ 0.09
Pcdha9Q91Y11 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC15.6■□□□□ 0.09
Pcdha9Q91Y11 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Pcdha9Q91Y11 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Pcdha9Q91Y11 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdha9Q91Y11 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC15.6■□□□□ 0.09
Pcdha9Q91Y11 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdha9Q91Y11 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdha9Q91Y11 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdha9Q91Y11 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdha9Q91Y11 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdha9Q91Y11 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdha9Q91Y11 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC15.6■□□□□ 0.09
Pcdha9Q91Y11 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdha9Q91Y11 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdha9Q91Y11 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdha9Q91Y11 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdha9Q91Y11 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC15.59■□□□□ 0.09
Pcdha9Q91Y11 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC15.59■□□□□ 0.09
Pcdha9Q91Y11 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Pcdha9Q91Y11 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Pcdha9Q91Y11 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdha9Q91Y11 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Pcdha9Q91Y11 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdha9Q91Y11 Gm37230-201ENSMUST00000194491 818 ntBASIC15.59■□□□□ 0.09
Pcdha9Q91Y11 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdha9Q91Y11 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC15.59■□□□□ 0.09
Pcdha9Q91Y11 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdha9Q91Y11 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdha9Q91Y11 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdha9Q91Y11 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdha9Q91Y11 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdha9Q91Y11 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdha9Q91Y11 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdha9Q91Y11 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdha9Q91Y11 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdha9Q91Y11 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdha9Q91Y11 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdha9Q91Y11 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdha9Q91Y11 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdha9Q91Y11 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdha9Q91Y11 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Pcdha9Q91Y11 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC15.58■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms