Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhb5Q91XZ5 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhb5Q91XZ5 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhb5Q91XZ5 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhb5Q91XZ5 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhb5Q91XZ5 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhb5Q91XZ5 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
Pcdhb5Q91XZ5 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhb5Q91XZ5 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhb5Q91XZ5 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhb5Q91XZ5 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Pcdhb5Q91XZ5 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhb5Q91XZ5 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Pcdhb5Q91XZ5 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Pcdhb5Q91XZ5 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC17.26■□□□□ 0.35
Pcdhb5Q91XZ5 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC17.26■□□□□ 0.35
Pcdhb5Q91XZ5 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC17.26■□□□□ 0.35
Pcdhb5Q91XZ5 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC17.26■□□□□ 0.35
Pcdhb5Q91XZ5 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhb5Q91XZ5 Gm20445-201ENSMUST00000061905 565 ntBASIC17.26■□□□□ 0.35
Pcdhb5Q91XZ5 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhb5Q91XZ5 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhb5Q91XZ5 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhb5Q91XZ5 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhb5Q91XZ5 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhb5Q91XZ5 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhb5Q91XZ5 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhb5Q91XZ5 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhb5Q91XZ5 AC133083.1-201ENSMUST00000221736 2209 ntBASIC17.25■□□□□ 0.35
Pcdhb5Q91XZ5 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhb5Q91XZ5 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhb5Q91XZ5 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhb5Q91XZ5 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhb5Q91XZ5 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhb5Q91XZ5 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhb5Q91XZ5 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhb5Q91XZ5 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhb5Q91XZ5 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
Pcdhb5Q91XZ5 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC17.25■□□□□ 0.35
Pcdhb5Q91XZ5 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Pcdhb5Q91XZ5 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhb5Q91XZ5 Gm12859-201ENSMUST00000117834 427 ntBASIC17.25■□□□□ 0.35
Pcdhb5Q91XZ5 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC17.25■□□□□ 0.35
Pcdhb5Q91XZ5 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC17.25■□□□□ 0.35
Pcdhb5Q91XZ5 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhb5Q91XZ5 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhb5Q91XZ5 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhb5Q91XZ5 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhb5Q91XZ5 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhb5Q91XZ5 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhb5Q91XZ5 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhb5Q91XZ5 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhb5Q91XZ5 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhb5Q91XZ5 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhb5Q91XZ5 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhb5Q91XZ5 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC17.24■□□□□ 0.35
Pcdhb5Q91XZ5 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhb5Q91XZ5 Sybu-209ENSMUST00000228639 4113 ntBASIC17.24■□□□□ 0.35
Pcdhb5Q91XZ5 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhb5Q91XZ5 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhb5Q91XZ5 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhb5Q91XZ5 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC17.24■□□□□ 0.35
Pcdhb5Q91XZ5 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhb5Q91XZ5 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhb5Q91XZ5 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhb5Q91XZ5 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhb5Q91XZ5 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhb5Q91XZ5 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhb5Q91XZ5 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhb5Q91XZ5 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC17.24■□□□□ 0.35
Pcdhb5Q91XZ5 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC17.24■□□□□ 0.35
Pcdhb5Q91XZ5 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC17.24■□□□□ 0.35
Pcdhb5Q91XZ5 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhb5Q91XZ5 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhb5Q91XZ5 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhb5Q91XZ5 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhb5Q91XZ5 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhb5Q91XZ5 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhb5Q91XZ5 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhb5Q91XZ5 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC17.24■□□□□ 0.35
Pcdhb5Q91XZ5 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Pcdhb5Q91XZ5 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhb5Q91XZ5 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhb5Q91XZ5 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhb5Q91XZ5 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhb5Q91XZ5 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhb5Q91XZ5 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhb5Q91XZ5 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhb5Q91XZ5 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhb5Q91XZ5 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhb5Q91XZ5 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Pcdhb5Q91XZ5 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Pcdhb5Q91XZ5 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC17.23■□□□□ 0.35
Pcdhb5Q91XZ5 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhb5Q91XZ5 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhb5Q91XZ5 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhb5Q91XZ5 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC17.23■□□□□ 0.35
Pcdhb5Q91XZ5 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhb5Q91XZ5 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC17.23■□□□□ 0.35
Pcdhb5Q91XZ5 AL593843.1-201ENSMUST00000195891 145 ntBASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms