Protein–RNA interactions for Protein: Q91WM3

Rrp9, U3 small nucleolar RNA-interacting protein 2, mousemouse

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp9Q91WM3 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rrp9Q91WM3 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC16.03■□□□□ 0.16
Rrp9Q91WM3 Gm40377-201ENSMUST00000204604 2015 ntBASIC16.03■□□□□ 0.16
Rrp9Q91WM3 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rrp9Q91WM3 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rrp9Q91WM3 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rrp9Q91WM3 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Rrp9Q91WM3 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rrp9Q91WM3 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Rrp9Q91WM3 Zfp264-201ENSMUST00000208656 1563 ntBASIC16.03■□□□□ 0.16
Rrp9Q91WM3 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rrp9Q91WM3 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rrp9Q91WM3 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Rrp9Q91WM3 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Rrp9Q91WM3 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rrp9Q91WM3 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Rrp9Q91WM3 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
Rrp9Q91WM3 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Rrp9Q91WM3 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rrp9Q91WM3 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Rrp9Q91WM3 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rrp9Q91WM3 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rrp9Q91WM3 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rrp9Q91WM3 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Rrp9Q91WM3 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC16.02■□□□□ 0.16
Rrp9Q91WM3 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rrp9Q91WM3 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rrp9Q91WM3 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Rrp9Q91WM3 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC16.02■□□□□ 0.16
Rrp9Q91WM3 Gm6257-201ENSMUST00000163864 910 ntBASIC16.02■□□□□ 0.16
Rrp9Q91WM3 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Rrp9Q91WM3 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC16.02■□□□□ 0.16
Rrp9Q91WM3 Gm43137-201ENSMUST00000198052 594 ntBASIC16.02■□□□□ 0.16
Rrp9Q91WM3 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rrp9Q91WM3 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rrp9Q91WM3 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rrp9Q91WM3 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rrp9Q91WM3 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rrp9Q91WM3 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rrp9Q91WM3 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rrp9Q91WM3 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rrp9Q91WM3 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Rrp9Q91WM3 Gm6858-201ENSMUST00000208582 1468 ntBASIC16.02■□□□□ 0.15
Rrp9Q91WM3 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rrp9Q91WM3 AC132265.1-201ENSMUST00000219233 1665 ntBASIC16.02■□□□□ 0.15
Rrp9Q91WM3 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Rrp9Q91WM3 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC16.01■□□□□ 0.15
Rrp9Q91WM3 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
Rrp9Q91WM3 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Rrp9Q91WM3 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rrp9Q91WM3 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Rrp9Q91WM3 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rrp9Q91WM3 AC116503.1-201ENSMUST00000215445 2192 ntBASIC16.01■□□□□ 0.15
Rrp9Q91WM3 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rrp9Q91WM3 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rrp9Q91WM3 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Rrp9Q91WM3 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rrp9Q91WM3 Gm37269-201ENSMUST00000193906 1891 ntBASIC16.01■□□□□ 0.15
Rrp9Q91WM3 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rrp9Q91WM3 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rrp9Q91WM3 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Rrp9Q91WM3 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Rrp9Q91WM3 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rrp9Q91WM3 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC16■□□□□ 0.15
Rrp9Q91WM3 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC16■□□□□ 0.15
Rrp9Q91WM3 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC16■□□□□ 0.15
Rrp9Q91WM3 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Rrp9Q91WM3 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rrp9Q91WM3 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rrp9Q91WM3 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC16■□□□□ 0.15
Rrp9Q91WM3 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Rrp9Q91WM3 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rrp9Q91WM3 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Rrp9Q91WM3 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Rrp9Q91WM3 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Rrp9Q91WM3 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rrp9Q91WM3 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Rrp9Q91WM3 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
Rrp9Q91WM3 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
Rrp9Q91WM3 AC154747.3-201ENSMUST00000224471 3470 ntBASIC16■□□□□ 0.15
Rrp9Q91WM3 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rrp9Q91WM3 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Rrp9Q91WM3 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rrp9Q91WM3 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rrp9Q91WM3 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
Rrp9Q91WM3 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rrp9Q91WM3 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rrp9Q91WM3 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Rrp9Q91WM3 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC15.99■□□□□ 0.15
Rrp9Q91WM3 Gm15039-201ENSMUST00000118914 875 ntBASIC15.99■□□□□ 0.15
Rrp9Q91WM3 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Rrp9Q91WM3 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC15.99■□□□□ 0.15
Rrp9Q91WM3 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Rrp9Q91WM3 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Rrp9Q91WM3 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rrp9Q91WM3 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rrp9Q91WM3 Mtag2-201ENSMUST00000058665 714 ntBASIC15.99■□□□□ 0.15
Rrp9Q91WM3 Gm5921-201ENSMUST00000075898 882 ntBASIC15.99■□□□□ 0.15
Rrp9Q91WM3 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rrp9Q91WM3 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms