Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh18Q8VHR0 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh18Q8VHR0 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.22□□□□□ -0.13
Pcdh18Q8VHR0 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh18Q8VHR0 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh18Q8VHR0 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Pcdh18Q8VHR0 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdh18Q8VHR0 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdh18Q8VHR0 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
Pcdh18Q8VHR0 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdh18Q8VHR0 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdh18Q8VHR0 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdh18Q8VHR0 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdh18Q8VHR0 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdh18Q8VHR0 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdh18Q8VHR0 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
Pcdh18Q8VHR0 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdh18Q8VHR0 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdh18Q8VHR0 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdh18Q8VHR0 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdh18Q8VHR0 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdh18Q8VHR0 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdh18Q8VHR0 Gm8655-201ENSMUST00000221159 852 ntBASIC14.21□□□□□ -0.13
Pcdh18Q8VHR0 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
Pcdh18Q8VHR0 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Pcdh18Q8VHR0 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdh18Q8VHR0 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdh18Q8VHR0 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Pcdh18Q8VHR0 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdh18Q8VHR0 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdh18Q8VHR0 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Pcdh18Q8VHR0 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Pcdh18Q8VHR0 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdh18Q8VHR0 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
Pcdh18Q8VHR0 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC14.21□□□□□ -0.13
Pcdh18Q8VHR0 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdh18Q8VHR0 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdh18Q8VHR0 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdh18Q8VHR0 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC14.21□□□□□ -0.14
Pcdh18Q8VHR0 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdh18Q8VHR0 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdh18Q8VHR0 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC14.21□□□□□ -0.14
Pcdh18Q8VHR0 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh18Q8VHR0 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC14.2□□□□□ -0.14
Pcdh18Q8VHR0 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh18Q8VHR0 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Pcdh18Q8VHR0 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh18Q8VHR0 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh18Q8VHR0 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh18Q8VHR0 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Pcdh18Q8VHR0 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC14.2□□□□□ -0.14
Pcdh18Q8VHR0 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC14.2□□□□□ -0.14
Pcdh18Q8VHR0 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh18Q8VHR0 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Pcdh18Q8VHR0 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC14.2□□□□□ -0.14
Pcdh18Q8VHR0 Gm14722-201ENSMUST00000118943 689 ntBASIC14.2□□□□□ -0.14
Pcdh18Q8VHR0 Gm8344-201ENSMUST00000119813 856 ntBASIC14.2□□□□□ -0.14
Pcdh18Q8VHR0 Gm17807-201ENSMUST00000186869 298 ntBASIC14.2□□□□□ -0.14
Pcdh18Q8VHR0 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh18Q8VHR0 Gm10459-201ENSMUST00000202708 1155 ntBASIC14.2□□□□□ -0.14
Pcdh18Q8VHR0 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC14.2□□□□□ -0.14
Pcdh18Q8VHR0 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh18Q8VHR0 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Pcdh18Q8VHR0 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Pcdh18Q8VHR0 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh18Q8VHR0 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC14.2□□□□□ -0.14
Pcdh18Q8VHR0 Gm10305-201ENSMUST00000195331 2475 ntBASIC14.2□□□□□ -0.14
Pcdh18Q8VHR0 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh18Q8VHR0 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh18Q8VHR0 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh18Q8VHR0 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh18Q8VHR0 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
Pcdh18Q8VHR0 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC14.19□□□□□ -0.14
Pcdh18Q8VHR0 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh18Q8VHR0 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh18Q8VHR0 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh18Q8VHR0 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Pcdh18Q8VHR0 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh18Q8VHR0 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh18Q8VHR0 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
Pcdh18Q8VHR0 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh18Q8VHR0 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh18Q8VHR0 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh18Q8VHR0 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC14.19□□□□□ -0.14
Pcdh18Q8VHR0 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC14.19□□□□□ -0.14
Pcdh18Q8VHR0 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh18Q8VHR0 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC14.19□□□□□ -0.14
Pcdh18Q8VHR0 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC14.19□□□□□ -0.14
Pcdh18Q8VHR0 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
Pcdh18Q8VHR0 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC14.19□□□□□ -0.14
Pcdh18Q8VHR0 Cmtm5-203ENSMUST00000227441 610 ntBASIC14.19□□□□□ -0.14
Pcdh18Q8VHR0 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh18Q8VHR0 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh18Q8VHR0 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC14.19□□□□□ -0.14
Pcdh18Q8VHR0 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh18Q8VHR0 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh18Q8VHR0 Grk6-207ENSMUST00000225925 2769 ntBASIC14.19□□□□□ -0.14
Pcdh18Q8VHR0 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC14.19□□□□□ -0.14
Pcdh18Q8VHR0 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
Pcdh18Q8VHR0 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms